Mercurial > repos > bebatut > plot_barplot

comparison plot_barplot.xml @ 4:fe4ee3b643f0 draft

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planemo upload for repository https://github.com/asaim/galaxytools/tree/master/tools/plot_barplot commit 74beefba9d138c892208b103b52e706ab4313a4a-dirty
author bebatut
date Mon, 18 Apr 2016 10:34:56 -0400
parents 81d4e20b0b23
children 2a9b68111074
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3:81d4e20b0b23 4:fe4ee3b643f0
73 <filter>output_format=="svg"</filter> 73 <filter>output_format=="svg"</filter>
74 </data> 74 </data>
75 </outputs> 75 </outputs>
76 76
77 <tests> 77 <tests>
78 <test>
79 <param name="input_file" value="input_file.txt"/>
80 <param name="header" value="FALSE"/>
81 <param name="output_format" value="pdf"/>
82 <param name="column_with_data" value="2"/>
83 <param name="names_column" value="1"/>
84 <param name="xlab" value=""/>
85 <param name="col" value="blue"/>
86 <param name="bottom_margin" value="5"/>
87 <param name="left_margin" value="19"/>
88 <param name="top_margin" value="1"/>
89 <param name="right_margin" value="1"/>
90 <output name="output_pdf_file" file="output_test_col_2.pdf"/>
91 </test>
92 <test>
93 <param name="input_file" value="input_file.txt"/>
94 <param name="header" value="FALSE"/>
95 <param name="output_format" value="pdf"/>
96 <param name="column_with_data" value="3"/>
97 <param name="names_column" value="1"/>
98 <param name="xlab" value=""/>
99 <param name="col" value="red"/>
100 <param name="bottom_margin" value="5"/>
101 <param name="left_margin" value="19"/>
102 <param name="top_margin" value="1"/>
103 <param name="right_margin" value="1"/>
104 <output name="output_pdf_file" file="output_test_col_3.pdf"/>
105 </test>
78 </tests> 106 </tests>
79 107
80 <help><![CDATA[ 108 <help><![CDATA[
81 **What it does** 109 **What it does**
82 110
83 This tool plot a barplot from a tabular file into different format files given different customizable parameters. 111 This tool plot a barplot.
84 112
85 This tool relies on R's barplot function. 113 .. image:: $PATH_TO_IMAGES/output.png
114 :scale: 50 %
86 115
116 This tool relies on R's barplot function. The input file must be a tabular file with multiple columns: a column with row names (for bar names) and a least a column with data. The output image is customizable (margin, legend positions, ...) and can be export in different format.
87 ]]></help> 117 ]]></help>
88 118
89 <citations> 119 <citations>
90 </citations> 120 </citations>
91 </tool> 121 </tool>