Mercurial > repos > bebatut > metaphlan2
comparison metaphlan2.xml @ 12:ac6ba16bda17 draft
planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/sortmerna/ commit ac257f4227abec655c923fe377af182588b6d7bf-dirty
author | bebatut |
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date | Thu, 05 Nov 2015 09:10:11 -0500 |
parents | 615111232408 |
children | 54f2ad0c6960 |
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11:615111232408 | 12:ac6ba16bda17 |
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17 ]]> | 17 ]]> |
18 </version_command> | 18 </version_command> |
19 | 19 |
20 <command> | 20 <command> |
21 <![CDATA[ | 21 <![CDATA[ |
22 python \${METAPHLAN2_DIR}/metaphlan.py | 22 python \${METAPHLAN2_DIR}/metaphlan2.py |
23 $input_file | 23 $input_file |
24 -o $output_file | 24 -o $output_file |
25 | 25 |
26 --input_type ${input_file.datatype.file_ext} | 26 --input_type ${input_file.datatype.file_ext} |
27 --mpa_pkl \${METAPHLAN2_DIR}/db_v20/mpa_v20_m200.pkl | 27 --mpa_pkl \${METAPHLAN2_DIR}/db_v20/mpa_v20_m200.pkl |