Mercurial > repos > bebatut > metaphlan2

comparison metaphlan2.xml @ 16:84dd21255542 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/sortmerna/ commit bf4b8a62e4414d68a917f5b72f3aedf34facaff2-dirty
author bebatut
date Thu, 05 Nov 2015 10:22:17 -0500
parents 42fb257a4490
children bee6cb51b96d
comparison
equal deleted inserted replaced
15:42fb257a4490 16:84dd21255542
34 --input_type ${input_file.datatype.file_ext} 34 --input_type ${input_file.datatype.file_ext}
35 --mpa_pkl \${METAPHLAN2_DIR}/db_v20/mpa_v20_m200.pkl 35 --mpa_pkl \${METAPHLAN2_DIR}/db_v20/mpa_v20_m200.pkl
36 --bowtie2db \${METAPHLAN2_DIR}/db_v20/mpa_v20_m200 36 --bowtie2db \${METAPHLAN2_DIR}/db_v20/mpa_v20_m200
37 37
38 $bowtie2_output 38 $bowtie2_output
39 #if $bowtie2_output == '' 39 #if not $bowtie2_output
40 --bowtie2out $bowtie2_output_file 40 --bowtie2out $bowtie2_output_file
41 #end if 41 #end if
42 42
43 -t $analysis_type.analysis_type_select 43 -t $analysis_type.analysis_type_select
44 #if $analysis_type.analysis_type_select == "rel_ab" 44 #if $analysis_type.analysis_type_select == "rel_ab"