Mercurial > repos > bebatut > metaphlan2

comparison metaphlan2krona.xml @ 29:713a83023626 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/metaphlan2/ commit 450bf3326f301c344103272b0d761e8625ce0c44-dirty
author bebatut
date Wed, 01 Jun 2016 10:43:23 -0400
parents 1d993cca38e3
children 99fe591b59fb
comparison
equal deleted inserted replaced
28:1d993cca38e3 29:713a83023626
31 <data format="tabular" name="krona" label="${tool.name} on ${on_string}: Krona file" /> 31 <data format="tabular" name="krona" label="${tool.name} on ${on_string}: Krona file" />
32 </outputs> 32 </outputs>
33 33
34 <tests> 34 <tests>
35 <test> 35 <test>
36 <param name="input_file" value="metaphlan2_profiled_metagenome.txt"/> 36 <param name="input_file" value="community_profile.tabular"/>
37 <output name="krona" file="metaphlan2krona_output_file.txt"/> 37 <output name="krona" file="formatted_to_krona.tabular"/>
38 </test> 38 </test>
39 </tests> 39 </tests>
40 40
41 <help><![CDATA[ 41 <help><![CDATA[
42 42
43 **What it does** 43 **What it does**
44 44
45 MetaPhlAn is a computational tool for profiling the composition of microbial 45 MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea, Eukaryotes and Viruses) from metagenomic shotgun sequencing data with species level resolution. For more information, check the `user manual <https://bitbucket.org/biobakery/metaphlan2/>`_.
46 communities (Bacteria, Archaea, Eukaryotes and Viruses) from metagenomic shotgun
47 sequencing data with species level resolution. For more information, check the
48 `user manual <https://bitbucket.org/biobakery/metaphlan2/>`_.
49 46
50 This tool format MetaPhlAn2 output for Krona. 47 This tool format MetaPhlAn2 output for Krona.
51 48
52 ]]></help> 49 ]]></help>
53 50