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comparison metaphlan2.xml @ 11:615111232408 draft

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planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/sortmerna/ commit 90c51a29d5aaab3f8dea67ac12098dc386e23b4e-dirty
author bebatut
date Thu, 05 Nov 2015 09:05:39 -0500
parents ebe6b7fab320
children ac6ba16bda17
comparison
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10:ebe6b7fab320 11:615111232408
30 $bowtie2_output 30 $bowtie2_output
31 #if $bowtie2_output == '' 31 #if $bowtie2_output == ''
32 --bowtie2out $bowtie2_output 32 --bowtie2out $bowtie2_output
33 #end if 33 #end if
34 34
35 -t $analysis_type$analysis_type_select 35 -t $analysis_type.analysis_type_select
36 #if $analysis_type.analysis_type_select == "rel_ab" 36 #if $analysis_type.analysis_type_select == "rel_ab"
37 --tax_lev $analysis_type.taxonomic_level 37 --tax_lev $analysis_type.taxonomic_level
38 #else if $analysis_type.analysis_type_select == "marker_ab_table" 38 #else if $analysis_type.analysis_type_select == "marker_ab_table"
39 --nreads $analysis_type.nreads 39 --nreads $analysis_type.nreads
40 #else if $analysis_type.analysis_type_select == "marker_pres_table" 40 #else if $analysis_type.analysis_type_select == "marker_pres_table"