Mercurial > repos > bebatut > humann2_regroup_table

annotate test-data/demo_pathabundance.tsv @ 6:4cbc93c6f409 draft default tip

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planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b'f45f31529390153bdaf93a3c94a65f6888ed484b\n'-dirty
author bebatut
date Fri, 03 Mar 2017 07:00:27 -0500
parents 1271ea9b43b6
children
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1271ea9b43b6 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b'f126d56aa160b10437d9dabf5c9e32fd4569fee6\n'-dirty
bebatut
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1 # Pathway demo_Abundance
1271ea9b43b6 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b'f126d56aa160b10437d9dabf5c9e32fd4569fee6\n'-dirty
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2 UNMAPPED 1548.1865983490
1271ea9b43b6 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b'f126d56aa160b10437d9dabf5c9e32fd4569fee6\n'-dirty
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3 UNINTEGRATED 6378.3363291102
1271ea9b43b6 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b'f126d56aa160b10437d9dabf5c9e32fd4569fee6\n'-dirty
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4 UNINTEGRATED|g__Bacteroides.s__Bacteroides_vulgatus 2909.3950875399
1271ea9b43b6 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b'f126d56aa160b10437d9dabf5c9e32fd4569fee6\n'-dirty
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5 UNINTEGRATED|g__Bacteroides.s__Bacteroides_dorei 1957.0469180460
1271ea9b43b6 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b'f126d56aa160b10437d9dabf5c9e32fd4569fee6\n'-dirty
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6 UNINTEGRATED|unclassified 46.5907339353
1271ea9b43b6 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b'f126d56aa160b10437d9dabf5c9e32fd4569fee6\n'-dirty
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7 PWY-5423: oleoresin monoterpene volatiles biosynthesis 13.7815543238
1271ea9b43b6 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b'f126d56aa160b10437d9dabf5c9e32fd4569fee6\n'-dirty
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8 PWY-5423: oleoresin monoterpene volatiles biosynthesis|unclassified 13.7815543238
1271ea9b43b6 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b'f126d56aa160b10437d9dabf5c9e32fd4569fee6\n'-dirty
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9 PWY-6305: putrescine biosynthesis IV 12.3568523173
1271ea9b43b6 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b'f126d56aa160b10437d9dabf5c9e32fd4569fee6\n'-dirty
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10 PWY-6305: putrescine biosynthesis IV|unclassified 12.3568523173
1271ea9b43b6 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b'f126d56aa160b10437d9dabf5c9e32fd4569fee6\n'-dirty
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11 PWY490-3: nitrate reduction VI (assimilatory) 10.9962495261
1271ea9b43b6 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b'f126d56aa160b10437d9dabf5c9e32fd4569fee6\n'-dirty
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12 PWY490-3: nitrate reduction VI (assimilatory)|unclassified 10.9962495261
1271ea9b43b6 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b'f126d56aa160b10437d9dabf5c9e32fd4569fee6\n'-dirty
bebatut
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13 PWY-1269: CMP-3-deoxy-D-manno-octulosonate biosynthesis I 10.6471569863
1271ea9b43b6 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b'f126d56aa160b10437d9dabf5c9e32fd4569fee6\n'-dirty
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14 PWY-1269: CMP-3-deoxy-D-manno-octulosonate biosynthesis I|unclassified 8.9740635174
1271ea9b43b6 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b'f126d56aa160b10437d9dabf5c9e32fd4569fee6\n'-dirty
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15 COA-PWY-1: coenzyme A biosynthesis II (mammalian) 6.3694267516
1271ea9b43b6 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b'f126d56aa160b10437d9dabf5c9e32fd4569fee6\n'-dirty
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16 COA-PWY-1: coenzyme A biosynthesis II (mammalian)|g__Bacteroides.s__Bacteroides_vulgatus 4.7961630695
1271ea9b43b6 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b'f126d56aa160b10437d9dabf5c9e32fd4569fee6\n'-dirty
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17 PWY-6700: queuosine biosynthesis 5.5726434156
1271ea9b43b6 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b'f126d56aa160b10437d9dabf5c9e32fd4569fee6\n'-dirty
bebatut
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18 PWY-6700: queuosine biosynthesis|g__Bacteroides.s__Bacteroides_dorei 3.4037771853
1271ea9b43b6 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b'f126d56aa160b10437d9dabf5c9e32fd4569fee6\n'-dirty
bebatut
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19 PWY-6700: queuosine biosynthesis|g__Bacteroides.s__Bacteroides_vulgatus 1.4512868417
1271ea9b43b6 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b'f126d56aa160b10437d9dabf5c9e32fd4569fee6\n'-dirty
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20 PWY-7111: pyruvate fermentation to isobutanol (engineered) 3.1668118122
1271ea9b43b6 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b'f126d56aa160b10437d9dabf5c9e32fd4569fee6\n'-dirty
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21 PWY-7111: pyruvate fermentation to isobutanol (engineered)|g__Bacteroides.s__Bacteroides_vulgatus 2.3731126339
1271ea9b43b6 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b'f126d56aa160b10437d9dabf5c9e32fd4569fee6\n'-dirty
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22 VALSYN-PWY: L-valine biosynthesis 3.1668118122
1271ea9b43b6 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b'f126d56aa160b10437d9dabf5c9e32fd4569fee6\n'-dirty
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23 VALSYN-PWY: L-valine biosynthesis|g__Bacteroides.s__Bacteroides_vulgatus 2.3731126339
1271ea9b43b6 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b'f126d56aa160b10437d9dabf5c9e32fd4569fee6\n'-dirty
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24 PWY-5695: urate biosynthesis/inosine 5'-phosphate degradation 2.8720157961
1271ea9b43b6 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b'f126d56aa160b10437d9dabf5c9e32fd4569fee6\n'-dirty
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25 PWY-5097: L-lysine biosynthesis VI 2.6664127226
1271ea9b43b6 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b'f126d56aa160b10437d9dabf5c9e32fd4569fee6\n'-dirty
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26 PWY-2942: L-lysine biosynthesis III 2.5305778153
1271ea9b43b6 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b'f126d56aa160b10437d9dabf5c9e32fd4569fee6\n'-dirty
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27 PWY-2942: L-lysine biosynthesis III|g__Bacteroides.s__Bacteroides_dorei 1.7857142857
1271ea9b43b6 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b'f126d56aa160b10437d9dabf5c9e32fd4569fee6\n'-dirty
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28 PWY-7219: adenosine ribonucleotides de novo biosynthesis 2.4290890774
1271ea9b43b6 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit b'f126d56aa160b10437d9dabf5c9e32fd4569fee6\n'-dirty
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29 PWY-7219: adenosine ribonucleotides de novo biosynthesis|g__Bacteroides.s__Bacteroides_dorei 1.2474418751