--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/humann2_reduce_table.xml	Mon Feb 20 11:26:18 2017 -0500
@@ -0,0 +1,65 @@
+<tool id="humann2_reduce_table" name="Reduce" version="@WRAPPER_VERSION@.0">
+    <description>a HUMAnN2 generated table</description>
+
+    <macros>
+        <import>humann2_macros.xml</import>
+    </macros>
+
+    <expand macro="requirements"/>
+    <expand macro="stdio"/>
+
+    <version_command>
+<![CDATA[
+    humann2_reduce_table --version
+]]>
+    </version_command>
+
+    <command><![CDATA[
+        humann2_reduce_table
+            --input '$input'
+            -o '$output_table'
+            --function '$function'
+            --sort-by '$sort' 
+    ]]></command>
+
+    <inputs>
+        <param argument="--input" type="data" format="tsv" label="Gene/pathway table"/>
+        <param argument="--function" type="select" label="Function to apply">
+            <option value="max" selected="true">Max</option>
+            <option value="sum">Sum</option>
+            <option value="mean">Mean</option>
+            <option value="min">Min</option>
+        </param>
+        <param name="sort" type="select" label="How to sort the output" argument="--sort-by">
+            <option value="name" selected="true">Name</option>
+            <option value="value">value</option>
+            <option value="level">level</option>
+        </param>
+    </inputs>
+
+    <outputs>
+        <data format="tsv" name="output_table" label="${tool.name} on ${on_string}: Reduced table" />
+    </outputs>
+
+    <tests>
+        <test>
+            <param name="input" value="demo_genefamilies.tsv"/>
+            <param name="function" value="max"/>
+            <param name="sort" value="name"/>
+            <output name="output_table" file="max_reduced_gene_family_abundance.tsv"/>
+        </test>
+    </tests>
+
+    <help><![CDATA[
+**What it does**
+
+HUMAnN is a pipeline for efficiently and accuretly profiling the presence/absence and abundance of microbial pathways in a community from metagenomic or metatranscriptomic sequencing data. `Read more about the tool <http://huttenhower.sph.harvard.edu/humann2/manual>`_.
+
+Reduce HUMAnN2 table is a tool to reduce the table given a function (max, sum, mean or min).
+
+HUMAnN is a pipeline for efficiently and accuretly profiling the presence/absence and abundance of microbial pathways in a community from metagenomic or metatranscriptomic sequencing data. `Read more about the tool <http://huttenhower.sph.harvard.edu/humann2/manual>`_.
+
+    ]]></help>
+
+    <expand macro="citations"/>
+</tool>