# Pathway	humann2_Abundance
PWY-3841: folate transformations II	4.1755866737
DTDPRHAMSYN-PWY: dTDP-L-rhamnose biosynthesis I	3.9102047853
DTDPRHAMSYN-PWY: dTDP-L-rhamnose biosynthesis I|unclassified	1.1069394070
PYRIDOXSYN-PWY: pyridoxal 5'-phosphate biosynthesis I	3.9080315296
PYRIDOXSYN-PWY: pyridoxal 5'-phosphate biosynthesis I|g__Bacteroides.s__Bacteroides_thetaiotaomicron	1.5106156966
PWY66-422: D-galactose degradation V (Leloir pathway)	3.7535152527
PWY66-422: D-galactose degradation V (Leloir pathway)|g__Bacteroides.s__Bacteroides_stercoris	1.1023839052
PWY66-422: D-galactose degradation V (Leloir pathway)|unclassified	0.2895806835
PWY-7208: superpathway of pyrimidine nucleobases salvage	3.6901146625
PWY-7208: superpathway of pyrimidine nucleobases salvage|g__Bacteroides.s__Bacteroides_thetaiotaomicron	2.4482393111
PWY-7208: superpathway of pyrimidine nucleobases salvage|unclassified	0.7776133358
1CMET2-PWY: N10-formyl-tetrahydrofolate biosynthesis	3.5209875974
PWY-7228: superpathway of guanosine nucleotides de novo biosynthesis I	3.2867179610
PWY-7228: superpathway of guanosine nucleotides de novo biosynthesis I|g__Bacteroides.s__Bacteroides_thetaiotaomicron	0.8478734825
PWY-7221: guanosine ribonucleotides de novo biosynthesis	3.2750640030
PWY-7221: guanosine ribonucleotides de novo biosynthesis|g__Bacteroides.s__Bacteroides_thetaiotaomicron	1.2068085186
PWY-7220: adenosine deoxyribonucleotides de novo biosynthesis II	3.2637816333
PWY-7220: adenosine deoxyribonucleotides de novo biosynthesis II|unclassified	1.1060255640
PWY-7220: adenosine deoxyribonucleotides de novo biosynthesis II|g__Bacteroides.s__Bacteroides_thetaiotaomicron	0.5892751915
PWY-7220: adenosine deoxyribonucleotides de novo biosynthesis II|g__Bacteroides.s__Bacteroides_stercoris	0.4387889425
PWY-7222: guanosine deoxyribonucleotides de novo biosynthesis II	3.2637816333
PWY-7222: guanosine deoxyribonucleotides de novo biosynthesis II|unclassified	1.1060255640
PWY-7222: guanosine deoxyribonucleotides de novo biosynthesis II|g__Bacteroides.s__Bacteroides_thetaiotaomicron	0.5892751915
PWY-7222: guanosine deoxyribonucleotides de novo biosynthesis II|g__Bacteroides.s__Bacteroides_stercoris	0.4387889425
PWY-1042: glycolysis IV (plant cytosol)	3.2219313012
PWY-1042: glycolysis IV (plant cytosol)|unclassified	0.9512116798
HSERMETANA-PWY: L-methionine biosynthesis III	3.1881967456
HSERMETANA-PWY: L-methionine biosynthesis III|g__Bacteroides.s__Bacteroides_thetaiotaomicron	1.1318619128
HSERMETANA-PWY: L-methionine biosynthesis III|unclassified	0.3289304590
PWY-6608: guanosine nucleotides degradation III	3.1147611886
PWY-5695: urate biosynthesis/inosine 5'-phosphate degradation	3.1100293202
SER-GLYSYN-PWY: superpathway of L-serine and glycine biosynthesis I	3.0526946246
PWY-5505: L-glutamate and L-glutamine biosynthesis	2.9898054399
PWY-5505: L-glutamate and L-glutamine biosynthesis|g__Bacteroides.s__Bacteroides_thetaiotaomicron	1.8604040064
PWY-5505: L-glutamate and L-glutamine biosynthesis|unclassified	0.9084206929
CALVIN-PWY: Calvin-Benson-Bassham cycle	2.9215628503
CALVIN-PWY: Calvin-Benson-Bassham cycle|unclassified	1.1526001412
PWY-5100: pyruvate fermentation to acetate and lactate II	2.8144503490
PWY-5100: pyruvate fermentation to acetate and lactate II|g__Bacteroides.s__Bacteroides_stercoris	1.6860746138
PWY-5100: pyruvate fermentation to acetate and lactate II|unclassified	0.7682306615
HOMOSER-METSYN-PWY: L-methionine biosynthesis I	2.7973467931
HOMOSER-METSYN-PWY: L-methionine biosynthesis I|g__Bacteroides.s__Bacteroides_thetaiotaomicron	1.3149243918
HOMOSER-METSYN-PWY: L-methionine biosynthesis I|unclassified	0.6871798510
PWY-6703: preQ0 biosynthesis	2.7628248214
PWY-6703: preQ0 biosynthesis|unclassified	0.2593448694
COA-PWY-1: coenzyme A biosynthesis II (mammalian)	2.7560992975
PWY-6125: superpathway of guanosine nucleotides de novo biosynthesis II	2.5572374190
PWY-5097: L-lysine biosynthesis VI	2.4596323855
PWY-5659: GDP-mannose biosynthesis	2.3863781930
PWY-5659: GDP-mannose biosynthesis|g__Bacteroides.s__Bacteroides_thetaiotaomicron	0.8912655971
PWY-5659: GDP-mannose biosynthesis|unclassified	0.0664432421
PWY-5030: L-histidine degradation III	2.3683757405
PWY-5030: L-histidine degradation III|unclassified	0.6284190351
PWY-6126: superpathway of adenosine nucleotides de novo biosynthesis II	2.3461386147
PWY-6126: superpathway of adenosine nucleotides de novo biosynthesis II|unclassified	1.4281569176
PWY-7219: adenosine ribonucleotides de novo biosynthesis	2.2649454173
PWY-7219: adenosine ribonucleotides de novo biosynthesis|unclassified	2.0777381106
PWY-7229: superpathway of adenosine nucleotides de novo biosynthesis I	2.2483480875
PWY-7229: superpathway of adenosine nucleotides de novo biosynthesis I|unclassified	1.5068280308
PWY-7111: pyruvate fermentation to isobutanol (engineered)	2.2252756179
PWY-7111: pyruvate fermentation to isobutanol (engineered)|unclassified	0.7780201225
PWY4FS-7: phosphatidylglycerol biosynthesis I (plastidic)	2.1672250526
PWY4FS-8: phosphatidylglycerol biosynthesis II (non-plastidic)	2.1672250526
PWY-6936: seleno-amino acid biosynthesis	2.1614177646
PWY-6936: seleno-amino acid biosynthesis|unclassified	0.7894903225
PHOSLIPSYN-PWY: superpathway of phospholipid biosynthesis I (bacteria)	2.0453936032
ILEUSYN-PWY: L-isoleucine biosynthesis I (from threonine)	1.8975161172
VALSYN-PWY: L-valine biosynthesis	1.8975161172
VALSYN-PWY: L-valine biosynthesis|g__Bacteroides.s__Bacteroides_thetaiotaomicron	0.8652390223
VALSYN-PWY: L-valine biosynthesis|unclassified	0.3867845231
NONOXIPENT-PWY: pentose phosphate pathway (non-oxidative branch)	1.8868756359
NONOXIPENT-PWY: pentose phosphate pathway (non-oxidative branch)|unclassified	0.4370019264
PWY-6385: peptidoglycan biosynthesis III (mycobacteria)	1.8748267214
PWY-6385: peptidoglycan biosynthesis III (mycobacteria)|unclassified	0.0857613466
ARGSYN-PWY: L-arginine biosynthesis I (via L-ornithine)	1.8640077196
PWY-7400: L-arginine biosynthesis IV (archaebacteria)	1.8626692421
TRNA-CHARGING-PWY: tRNA charging	1.8488480135
TRNA-CHARGING-PWY: tRNA charging|unclassified	0.2385880597
PWY-2942: L-lysine biosynthesis III	1.8433035294
ANAGLYCOLYSIS-PWY: glycolysis III (from glucose)	1.8131720233
ANAGLYCOLYSIS-PWY: glycolysis III (from glucose)|unclassified	0.0940161143
PEPTIDOGLYCANSYN-PWY: peptidoglycan biosynthesis I (meso-diaminopimelate containing)	1.8025319772
PEPTIDOGLYCANSYN-PWY: peptidoglycan biosynthesis I (meso-diaminopimelate containing)|unclassified	0.0879876964
PWY-5154: L-arginine biosynthesis III (via N-acetyl-L-citrulline)	1.7689928565
PWY-5667: CDP-diacylglycerol biosynthesis I	1.7575835877
PWY0-1319: CDP-diacylglycerol biosynthesis II	1.7575835877
GALACTUROCAT-PWY: D-galacturonate degradation I	1.7409218542
PWY-4984: urea cycle	1.7259063333
GLUCONEO-PWY: gluconeogenesis I	1.7208595669
PWY-7242: D-fructuronate degradation	1.6989384181
PWY66-400: glycolysis VI (metazoan)	1.6488729819
PWY66-400: glycolysis VI (metazoan)|unclassified	0.5157092865
GLUCUROCAT-PWY: superpathway of β-D-glucuronide and D-glucuronate degradation	1.6200478386
PWY-6387: UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing)	1.6184287452
PWY-6387: UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing)|unclassified	0.0707936428
PWY-6507: 4-deoxy-L-threo-hex-4-enopyranuronate degradation	1.6117113393
PWY0-162: superpathway of pyrimidine ribonucleotides de novo biosynthesis	1.6002627097
PWY0-162: superpathway of pyrimidine ribonucleotides de novo biosynthesis|unclassified	0.1856025356
ASPASN-PWY: superpathway of L-aspartate and L-asparagine biosynthesis	1.5618996123
ASPASN-PWY: superpathway of L-aspartate and L-asparagine biosynthesis|g__Bacteroides.s__Bacteroides_thetaiotaomicron	0.9865581453
ASPASN-PWY: superpathway of L-aspartate and L-asparagine biosynthesis|unclassified	0.7296794593
GLUTORN-PWY: L-ornithine biosynthesis	1.5424780957
GLUTORN-PWY: L-ornithine biosynthesis|unclassified	0.5831449560
CITRULBIO-PWY: L-citrulline biosynthesis	1.5324008783
CITRULBIO-PWY: L-citrulline biosynthesis|unclassified	0.3038844506
BRANCHED-CHAIN-AA-SYN-PWY: superpathway of branched amino acid biosynthesis	1.4999151740
ARGSYNBSUB-PWY: L-arginine biosynthesis II (acetyl cycle)	1.4904639155
ARGSYNBSUB-PWY: L-arginine biosynthesis II (acetyl cycle)|unclassified	0.7790137633
ANAEROFRUCAT-PWY: homolactic fermentation	1.4497682276
ANAEROFRUCAT-PWY: homolactic fermentation|unclassified	0.1268553505
PWY-6151: S-adenosyl-L-methionine cycle I	1.3952757895
GLYCOLYSIS: glycolysis I (from glucose 6-phosphate)	1.3776526226
GLYCOLYSIS: glycolysis I (from glucose 6-phosphate)|unclassified	0.0902213781
PWY-6124: inosine-5'-phosphate biosynthesis II	1.3660441439
PWY-6124: inosine-5'-phosphate biosynthesis II|unclassified	1.2850176825
PWY-3781: aerobic respiration I (cytochrome c)	1.3232553010
PWY-5484: glycolysis II (from fructose 6-phosphate)	1.3224090729
PWY-5484: glycolysis II (from fructose 6-phosphate)|unclassified	0.0905888689
FASYN-INITIAL-PWY: superpathway of fatty acid biosynthesis initiation (E. coli)	1.3216095864
FASYN-INITIAL-PWY: superpathway of fatty acid biosynthesis initiation (E. coli)|unclassified	0.1975901311
PWY-6123: inosine-5'-phosphate biosynthesis I	1.2692926051
PWY-6123: inosine-5'-phosphate biosynthesis I|unclassified	0.1514592087
PWY-5104: L-isoleucine biosynthesis IV	1.2492644752
PWY-5104: L-isoleucine biosynthesis IV|unclassified	0.4174807444
PWY-5686: UMP biosynthesis	1.2358140376
PWY-5686: UMP biosynthesis|unclassified	1.0203546133
PWY-5103: L-isoleucine biosynthesis III	1.1996541791
PWY-1269: CMP-3-deoxy-D-manno-octulosonate biosynthesis I	1.1812736813
PWY-7184: pyrimidine deoxyribonucleotides de novo biosynthesis I	1.1687080489
ARGININE-SYN4-PWY: L-ornithine de novo  biosynthesis	1.1508291431
ARGININE-SYN4-PWY: L-ornithine de novo  biosynthesis|unclassified	0.9263731883
RHAMCAT-PWY: L-rhamnose degradation I	1.1337868481
PWY-6892: thiazole biosynthesis I (E. coli)	1.1226683773
PWY-4981: L-proline biosynthesis II (from arginine)	1.0363034345
PWY-5101: L-isoleucine biosynthesis II	0.9968559463
PWY-5101: L-isoleucine biosynthesis II|unclassified	0.2535656797
THISYN-PWY: superpathway of thiamin diphosphate biosynthesis I	0.9113734406
PWY66-389: phytol degradation	0.8260551103
PWY66-389: phytol degradation|unclassified	0.2431091839
PWY-7316: dTDP-N-acetylviosamine biosynthesis	0.8041721326
PWY-7316: dTDP-N-acetylviosamine biosynthesis|unclassified	0.6470228868
PWY-6628: superpathway of L-phenylalanine biosynthesis	0.7658055582
PWY-841: superpathway of purine nucleotides de novo biosynthesis I	0.7563456094
PWY-7237: myo-, chiro- and scillo-inositol degradation	0.7377971759
PWY-7237: myo-, chiro- and scillo-inositol degradation|unclassified	0.7377971759
HISDEG-PWY: L-histidine degradation I	0.7365009510
HISDEG-PWY: L-histidine degradation I|unclassified	0.4986254423
COMPLETE-ARO-PWY: superpathway of aromatic amino acid biosynthesis	0.6754230985
ARO-PWY: chorismate biosynthesis I	0.6019583002
PWY-7357: thiamin formation from pyrithiamine and oxythiamine (yeast)	0.6018628039
PWY-7357: thiamin formation from pyrithiamine and oxythiamine (yeast)|unclassified	0.5668692221
PWY-6897: thiamin salvage II	0.5984945722
PWY-6897: thiamin salvage II|unclassified	0.5749647735
GALACT-GLUCUROCAT-PWY: superpathway of hexuronide and hexuronate degradation	0.5859947177
PWY-6163: chorismate biosynthesis from 3-dehydroquinate	0.5818308366
PWY-6163: chorismate biosynthesis from 3-dehydroquinate|unclassified	0.5059907492
PWY-6549: L-glutamine biosynthesis III	0.5710894947
PWY-6549: L-glutamine biosynthesis III|unclassified	0.3708561244
DAPLYSINESYN-PWY: L-lysine biosynthesis I	0.5489682117
PWY-6527: stachyose degradation	0.5280252920
PWY-6527: stachyose degradation|unclassified	0.3282233503
PWY-6305: putrescine biosynthesis IV	0.5008762623
UDPNAGSYN-PWY: UDP-N-acetyl-D-glucosamine biosynthesis I	0.4939086377
UDPNAGSYN-PWY: UDP-N-acetyl-D-glucosamine biosynthesis I|unclassified	0.4002606477
PWY-6630: superpathway of L-tyrosine biosynthesis	0.4854554496
OANTIGEN-PWY: O-antigen building blocks biosynthesis (E. coli)	0.4770316945
OANTIGEN-PWY: O-antigen building blocks biosynthesis (E. coli)|unclassified	0.3808815669
P105-PWY: TCA cycle IV (2-oxoglutarate decarboxylase)	0.3884658334
P105-PWY: TCA cycle IV (2-oxoglutarate decarboxylase)|unclassified	0.2038961260
PWY-7388: octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)	0.3807405046
PWY-7388: octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)|unclassified	0.1945397242
PYRIDNUCSYN-PWY: NAD biosynthesis I (from aspartate)	0.3718319538
PYRIDNUCSYN-PWY: NAD biosynthesis I (from aspartate)|unclassified	0.3333965179
PANTO-PWY: phosphopantothenate biosynthesis I	0.3680897034
PWY-7211: superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis	0.3586163069
PWY-5690: TCA cycle II (plants and fungi)	0.3359682684
PWY-5690: TCA cycle II (plants and fungi)|unclassified	0.1982489176
PWY-6121: 5-aminoimidazole ribonucleotide biosynthesis I	0.3320859426
PWY-6121: 5-aminoimidazole ribonucleotide biosynthesis I|unclassified	0.3244872914
PWY0-1061: superpathway of L-alanine biosynthesis	0.3155567700
PWY0-1061: superpathway of L-alanine biosynthesis|unclassified	0.2425074002
PWY-5723: Rubisco shunt	0.3109219292
METHGLYUT-PWY: superpathway of methylglyoxal degradation	0.3102358892
METHGLYUT-PWY: superpathway of methylglyoxal degradation|unclassified	0.3102358892
PWY-6122: 5-aminoimidazole ribonucleotide biosynthesis II	0.3057585889
PWY-6122: 5-aminoimidazole ribonucleotide biosynthesis II|unclassified	0.2977343123
PWY-6277: superpathway of 5-aminoimidazole ribonucleotide biosynthesis	0.3057585889
PWY-6277: superpathway of 5-aminoimidazole ribonucleotide biosynthesis|unclassified	0.2977343123
PWY-6737: starch degradation V	0.3012356519
PWY-6737: starch degradation V|unclassified	0.1849423235
PWY-7115: C4 photosynthetic carbon assimilation cycle, NAD-ME type	0.2664213171
PWY-6609: adenine and adenosine salvage III	0.2426520915
P441-PWY: superpathway of N-acetylneuraminate degradation	0.2360530382
PWY-5855: ubiquinol-7 biosynthesis (prokaryotic)	0.2217263942
PWY-5855: ubiquinol-7 biosynthesis (prokaryotic)|unclassified	0.2217263942
PWY-5857: ubiquinol-10 biosynthesis (prokaryotic)	0.2217263942
PWY-5857: ubiquinol-10 biosynthesis (prokaryotic)|unclassified	0.2217263942
PWY4LZ-257: superpathway of fermentation (Chlamydomonas reinhardtii)	0.2187944095
PWY4LZ-257: superpathway of fermentation (Chlamydomonas reinhardtii)|unclassified	0.1964138719
PWY-724: superpathway of L-lysine, L-threonine and L-methionine biosynthesis II	0.2113701553
PWY-6606: guanosine nucleotides degradation II	0.2087172646
PWY-3001: superpathway of L-isoleucine biosynthesis I	0.2065458549
DENOVOPURINE2-PWY: superpathway of purine nucleotides de novo biosynthesis II	0.2055899089
KETOGLUCONMET-PWY: ketogluconate metabolism	0.2002474397
KETOGLUCONMET-PWY: ketogluconate metabolism|unclassified	0.2002474397
P185-PWY: formaldehyde assimilation III (dihydroxyacetone cycle)	0.1988679321
PWY-5941: glycogen degradation II (eukaryotic)	0.1847029287
PWY-5941: glycogen degradation II (eukaryotic)|unclassified	0.1269386761
P161-PWY: acetylene degradation	0.1791871067
P161-PWY: acetylene degradation|unclassified	0.1648686045
PWY-6595: superpathway of guanosine nucleotides degradation (plants)	0.1756270464
RIBOSYN2-PWY: flavin biosynthesis I (bacteria and plants)	0.1647809847
RIBOSYN2-PWY: flavin biosynthesis I (bacteria and plants)|unclassified	0.1367619268
PWY-6435: 4-hydroxybenzoate biosynthesis V	0.1604038864
PWY-6435: 4-hydroxybenzoate biosynthesis V|unclassified	0.1358838570
PWY-5464: superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle	0.1386668904
THISYNARA-PWY: superpathway of thiamin diphosphate biosynthesis III (eukaryotes)	0.1384835129
THISYNARA-PWY: superpathway of thiamin diphosphate biosynthesis III (eukaryotes)|unclassified	0.1367667494
THRESYN-PWY: superpathway of L-threonine biosynthesis	0.1314728131
THRESYN-PWY: superpathway of L-threonine biosynthesis|unclassified	0.0981881841
PWY-5754: 4-hydroxybenzoate biosynthesis I (eukaryotes)	0.1311761424
PWY-5754: 4-hydroxybenzoate biosynthesis I (eukaryotes)|unclassified	0.1311761424
PWY0-1586: peptidoglycan maturation (meso-diaminopimelate containing)	0.1094481814
PWY0-1586: peptidoglycan maturation (meso-diaminopimelate containing)|unclassified	0.0932931285
FAO-PWY: fatty acid β-oxidation I	0.1023692392
FAO-PWY: fatty acid β-oxidation I|unclassified	0.0850684758
PWY-5136: fatty acid β-oxidation II (peroxisome)	0.1002625664
PWY-5136: fatty acid β-oxidation II (peroxisome)|unclassified	0.0809203960
PWY-7007: methyl ketone biosynthesis	0.0945959158
PWY-7007: methyl ketone biosynthesis|unclassified	0.0721933992
GLCMANNANAUT-PWY: superpathway of N-acetylglucosamine, N-acetylmannosamine and N-acetylneuraminate degradation	0.0934159570
GLCMANNANAUT-PWY: superpathway of N-acetylglucosamine, N-acetylmannosamine and N-acetylneuraminate degradation|unclassified	0.0534537034
PWY-6769: rhamnogalacturonan type I degradation I (fungi)	0.0900255174
PWY-6769: rhamnogalacturonan type I degradation I (fungi)|unclassified	0.0900255174
PWY-6309: L-tryptophan degradation XI (mammalian, via kynurenine)	0.0873342532
PWY-6309: L-tryptophan degradation XI (mammalian, via kynurenine)|unclassified	0.0873342532
PWY-7094: fatty acid salvage	0.0854465960
PWY-7094: fatty acid salvage|unclassified	0.0730465910
GLUDEG-I-PWY: GABA shunt	0.0762605553
GLUDEG-I-PWY: GABA shunt|unclassified	0.0750554732
PWY0-1297: superpathway of purine deoxyribonucleosides degradation	0.0684397073
PWY-7234: inosine-5'-phosphate biosynthesis III	0.0644973921
PWY-7234: inosine-5'-phosphate biosynthesis III|unclassified	0.0542823003
PWY-5173: superpathway of acetyl-CoA biosynthesis	0.0531380604
PWY-5173: superpathway of acetyl-CoA biosynthesis|unclassified	0.0504007496
PWY-6731: starch degradation III	0.0481515529
PWY-6731: starch degradation III|unclassified	0.0429002960
PWY-4041: γ-glutamyl cycle	0.0375475113
PWY-4041: γ-glutamyl cycle|unclassified	0.0375475113
PWY-7398: coumarins biosynthesis (engineered)	0.0375437337
PWY-7398: coumarins biosynthesis (engineered)|unclassified	0.0375437337
GLYOXYLATE-BYPASS: glyoxylate cycle	0.0258268848
GLYOXYLATE-BYPASS: glyoxylate cycle|unclassified	0.0256003684
GLYCOL-GLYOXDEG-PWY: superpathway of glycol metabolism and degradation	0.0248957960
GLYCOL-GLYOXDEG-PWY: superpathway of glycol metabolism and degradation|unclassified	0.0248957960