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comparison test-data/humann2_sam_fasta_joined_pathcoverage.tsv @ 0:947012405a6e draft

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planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/humann2/ commit dd6f3fda4d992efa4a91ee0823ecc3af8a9532d3-dirty
author bebatut
date Thu, 17 Dec 2015 08:58:05 -0500
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1 # Pathway dataset_22 dataset_35
2 1CMET2-PWY: N10-formyl-tetrahydrofolate biosynthesis 0.8729365703 0.7495073164
3 1CMET2-PWY: N10-formyl-tetrahydrofolate biosynthesis|unclassified 0.6700031759 0
4 ANAEROFRUCAT-PWY: homolactic fermentation 0.6464300682 0
5 ANAEROFRUCAT-PWY: homolactic fermentation|unclassified 0.7801148737 0
6 ANAGLYCOLYSIS-PWY: glycolysis III (from glucose) 0.6899686638 0
7 ANAGLYCOLYSIS-PWY: glycolysis III (from glucose)|unclassified 0.8050612921 0
8 ARGININE-SYN4-PWY: L-ornithine de novo biosynthesis 0.6222769007 0
9 ARGININE-SYN4-PWY: L-ornithine de novo biosynthesis|unclassified 0.7848769794 0
10 ARGSYN-PWY: L-arginine biosynthesis I (via L-ornithine) 0.7233574473 0
11 ARGSYNBSUB-PWY: L-arginine biosynthesis II (acetyl cycle) 0.6861940520 0
12 ARGSYNBSUB-PWY: L-arginine biosynthesis II (acetyl cycle)|unclassified 0.7455498075 0
13 ARO-PWY: chorismate biosynthesis I 0.4427999196 0
14 ARO-PWY: chorismate biosynthesis I|unclassified 0.6469864864 0
15 ASPASN-PWY: superpathway of L-aspartate and L-asparagine biosynthesis 0.7051730599 0.5008438557
16 ASPASN-PWY: superpathway of L-aspartate and L-asparagine biosynthesis|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0 0.5109686863
17 ASPASN-PWY: superpathway of L-aspartate and L-asparagine biosynthesis|unclassified 0.8058497596 0
18 BRANCHED-CHAIN-AA-SYN-PWY: superpathway of branched amino acid biosynthesis 0.6893189444 0
19 BRANCHED-CHAIN-AA-SYN-PWY: superpathway of branched amino acid biosynthesis|unclassified 0.6775982335 0
20 CALVIN-PWY: Calvin-Benson-Bassham cycle 0.8337497664 0.5485251397
21 CALVIN-PWY: Calvin-Benson-Bassham cycle|unclassified 0.8467986609 0
22 CITRULBIO-PWY: L-citrulline biosynthesis 0.6746810344 0
23 CITRULBIO-PWY: L-citrulline biosynthesis|unclassified 0.6454139515 0
24 COA-PWY-1: coenzyme A biosynthesis II (mammalian) 0.8502270732 0
25 COMPLETE-ARO-PWY: superpathway of aromatic amino acid biosynthesis 0.4720217027 0
26 COMPLETE-ARO-PWY: superpathway of aromatic amino acid biosynthesis|unclassified 0.6691876639 0
27 DAPLYSINESYN-PWY: L-lysine biosynthesis I 0.4302828994 0
28 DAPLYSINESYN-PWY: L-lysine biosynthesis I|unclassified 0.5287826956 0
29 DENOVOPURINE2-PWY: superpathway of purine nucleotides de novo biosynthesis II 0.3190137611 0
30 DTDPRHAMSYN-PWY: dTDP-L-rhamnose biosynthesis I 0.8224263577 0.6416934147
31 DTDPRHAMSYN-PWY: dTDP-L-rhamnose biosynthesis I|unclassified 0.8552022126 0
32 FAO-PWY: fatty acid β-oxidation I 0.1629336873 0
33 FAO-PWY: fatty acid β-oxidation I|unclassified 0.3812966928 0
34 FASYN-INITIAL-PWY: superpathway of fatty acid biosynthesis initiation (E. coli) 0.5933622121 0
35 FASYN-INITIAL-PWY: superpathway of fatty acid biosynthesis initiation (E. coli)|unclassified 0.6452232715 0
36 GALACT-GLUCUROCAT-PWY: superpathway of hexuronide and hexuronate degradation 0.4616579256 0
37 GALACTUROCAT-PWY: D-galacturonate degradation I 0.7121932522 0.4965486979
38 GLCMANNANAUT-PWY: superpathway of N-acetylglucosamine, N-acetylmannosamine and N-acetylneuraminate degradation 0.1564847406 0
39 GLCMANNANAUT-PWY: superpathway of N-acetylglucosamine, N-acetylmannosamine and N-acetylneuraminate degradation|unclassified 0.3564574827 0
40 GLUCONEO-PWY: gluconeogenesis I 0.7277918451 0
41 GLUCUROCAT-PWY: superpathway of β-D-glucuronide and D-glucuronate degradation 0.6321855739 0.5677917487
42 GLUDEG-I-PWY: GABA shunt 0.1373812518 0
43 GLUDEG-I-PWY: GABA shunt|unclassified 0.3674207289 0
44 GLUTORN-PWY: L-ornithine biosynthesis 0.6190679362 0
45 GLUTORN-PWY: L-ornithine biosynthesis|unclassified 0.6607560005 0
46 GLYCOL-GLYOXDEG-PWY: superpathway of glycol metabolism and degradation 0.0672540914 0
47 GLYCOL-GLYOXDEG-PWY: superpathway of glycol metabolism and degradation|unclassified 0.2519292377 0
48 GLYCOLYSIS: glycolysis I (from glucose 6-phosphate) 0.6074048961 0
49 GLYCOLYSIS: glycolysis I (from glucose 6-phosphate)|unclassified 0.7523779429 0
50 GLYOXYLATE-BYPASS: glyoxylate cycle 0.0722295747 0
51 GLYOXYLATE-BYPASS: glyoxylate cycle|unclassified 0.2683685093 0
52 HISDEG-PWY: L-histidine degradation I 0.5031112522 0
53 HISDEG-PWY: L-histidine degradation I|unclassified 0.6284442371 0
54 HOMOSER-METSYN-PWY: L-methionine biosynthesis I 0.8043658245 0.6441336419
55 HOMOSER-METSYN-PWY: L-methionine biosynthesis I|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0 0.5982506088
56 HOMOSER-METSYN-PWY: L-methionine biosynthesis I|unclassified 0.6961656540 0
57 HSERMETANA-PWY: L-methionine biosynthesis III 0.7336908972 0.6861852057
58 HSERMETANA-PWY: L-methionine biosynthesis III|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0 0.5522121285
59 HSERMETANA-PWY: L-methionine biosynthesis III|unclassified 0.5781347832 0
60 ILEUSYN-PWY: L-isoleucine biosynthesis I (from threonine) 0.7506671584 0
61 ILEUSYN-PWY: L-isoleucine biosynthesis I (from threonine)|unclassified 0.7749176544 0
62 KETOGLUCONMET-PWY: ketogluconate metabolism 0.2366729714 0
63 KETOGLUCONMET-PWY: ketogluconate metabolism|unclassified 0.4754618892 0
64 METHGLYUT-PWY: superpathway of methylglyoxal degradation 0.3161361780 0
65 METHGLYUT-PWY: superpathway of methylglyoxal degradation|unclassified 0.5586973417 0
66 NONOXIPENT-PWY: pentose phosphate pathway (non-oxidative branch) 0.6354032054 0
67 NONOXIPENT-PWY: pentose phosphate pathway (non-oxidative branch)|unclassified 0.8029823631 0
68 OANTIGEN-PWY: O-antigen building blocks biosynthesis (E. coli) 0.4200227519 0
69 OANTIGEN-PWY: O-antigen building blocks biosynthesis (E. coli)|unclassified 0.6320075169 0
70 P105-PWY: TCA cycle IV (2-oxoglutarate decarboxylase) 0.4037102644 0
71 P105-PWY: TCA cycle IV (2-oxoglutarate decarboxylase)|unclassified 0.5341809318 0
72 P161-PWY: acetylene degradation 0.2220696908 0
73 P161-PWY: acetylene degradation|unclassified 0.4709193837 0
74 P185-PWY: formaldehyde assimilation III (dihydroxyacetone cycle) 0.2137629302 0
75 P185-PWY: formaldehyde assimilation III (dihydroxyacetone cycle)|unclassified 0.4065691125 0
76 P241-PWY: coenzyme B biosynthesis 0.0921843323 0
77 P241-PWY: coenzyme B biosynthesis|unclassified 0.2829168302 0
78 P441-PWY: superpathway of N-acetylneuraminate degradation 0.3019954557 0
79 P441-PWY: superpathway of N-acetylneuraminate degradation|unclassified 0.4792394160 0
80 PEPTIDOGLYCANSYN-PWY: peptidoglycan biosynthesis I (meso-diaminopimelate containing) 0.6370346300 0
81 PEPTIDOGLYCANSYN-PWY: peptidoglycan biosynthesis I (meso-diaminopimelate containing)|unclassified 0.7284031659 0
82 PHOSLIPSYN-PWY: superpathway of phospholipid biosynthesis I (bacteria) 0.4804450875 0
83 PPGPPMET-PWY: ppGpp biosynthesis 0.2952768423 0
84 PWY-1042: glycolysis IV (plant cytosol) 0.8282950402 0
85 PWY-1042: glycolysis IV (plant cytosol)|unclassified 0.8122174222 0
86 PWY-1269: CMP-3-deoxy-D-manno-octulosonate biosynthesis I 0.5980601338 0
87 PWY-1269: CMP-3-deoxy-D-manno-octulosonate biosynthesis I|unclassified 0.6061664934 0
88 PWY-2942: L-lysine biosynthesis III 0.6657732550 0
89 PWY-2942: L-lysine biosynthesis III|unclassified 0.7189492691 0
90 PWY-3001: superpathway of L-isoleucine biosynthesis I 0.2859572809 0
91 PWY-3001: superpathway of L-isoleucine biosynthesis I|unclassified 0.5276279473 0
92 PWY-3781: aerobic respiration I (cytochrome c) 0 0.4275710623
93 PWY-3841: folate transformations II 0.8955142224 0.7981953577
94 PWY-3841: folate transformations II|unclassified 0.8386297539 0
95 PWY-4041: γ-glutamyl cycle 0.0908494984 0
96 PWY-4041: γ-glutamyl cycle|unclassified 0.3035550790 0
97 PWY-4984: urea cycle 0.7268257420 0
98 PWY-5030: L-histidine degradation III 0.7336504793 0.5883052819
99 PWY-5030: L-histidine degradation III|unclassified 0.7224140937 0
100 PWY-5097: L-lysine biosynthesis VI 0.6916200935 0
101 PWY-5097: L-lysine biosynthesis VI|unclassified 0.7269447790 0
102 PWY-5100: pyruvate fermentation to acetate and lactate II 0.8196052821 0.7410248669
103 PWY-5100: pyruvate fermentation to acetate and lactate II|g__Bacteroides.s__Bacteroides_stercoris 0 0.7881393909
104 PWY-5100: pyruvate fermentation to acetate and lactate II|unclassified 0.7310709305 0
105 PWY-5101: L-isoleucine biosynthesis II 0.4889865976 0
106 PWY-5101: L-isoleucine biosynthesis II|unclassified 0.5999167857 0
107 PWY-5103: L-isoleucine biosynthesis III 0.6293494410 0
108 PWY-5103: L-isoleucine biosynthesis III|unclassified 0.6403851357 0
109 PWY-5104: L-isoleucine biosynthesis IV 0.6292081440 0
110 PWY-5104: L-isoleucine biosynthesis IV|unclassified 0.6129291732 0
111 PWY-5136: fatty acid β-oxidation II (peroxisome) 0.1635158251 0
112 PWY-5136: fatty acid β-oxidation II (peroxisome)|unclassified 0.3825037170 0
113 PWY-5154: L-arginine biosynthesis III (via N-acetyl-L-citrulline) 0.6434636327 0
114 PWY-5173: superpathway of acetyl-CoA biosynthesis 0.1094164471 0
115 PWY-5173: superpathway of acetyl-CoA biosynthesis|unclassified 0.3112277169 0
116 PWY-5265: peptidoglycan biosynthesis II (staphylococci) 0.2545518546 0
117 PWY-5265: peptidoglycan biosynthesis II (staphylococci)|unclassified 0.5027532562 0
118 PWY-5464: superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle 0.2360804781 0
119 PWY-5464: superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle|unclassified 0.4606470990 0
120 PWY-5484: glycolysis II (from fructose 6-phosphate) 0.5993835016 0
121 PWY-5484: glycolysis II (from fructose 6-phosphate)|unclassified 0.7471966903 0
122 PWY-5505: L-glutamate and L-glutamine biosynthesis 0.7936139721 0.6903428673
123 PWY-5505: L-glutamate and L-glutamine biosynthesis|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0.5120585833 0.7047445298
124 PWY-5505: L-glutamate and L-glutamine biosynthesis|unclassified 0.8162544880 0
125 PWY-5659: GDP-mannose biosynthesis 0.7545745035 0.5282770203
126 PWY-5659: GDP-mannose biosynthesis|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0 0.4801917076
127 PWY-5659: GDP-mannose biosynthesis|unclassified 0.3471610201 0
128 PWY-5667: CDP-diacylglycerol biosynthesis I 0.4314096708 0
129 PWY-5667: CDP-diacylglycerol biosynthesis I|unclassified 0.3738566572 0
130 PWY-5686: UMP biosynthesis 0.6737531535 0
131 PWY-5686: UMP biosynthesis|unclassified 0.7968458014 0
132 PWY-5690: TCA cycle II (plants and fungi) 0.4010520280 0
133 PWY-5690: TCA cycle II (plants and fungi)|unclassified 0.5118025880 0
134 PWY-5754: 4-hydroxybenzoate biosynthesis I (eukaryotes) 0.1970239978 0
135 PWY-5754: 4-hydroxybenzoate biosynthesis I (eukaryotes)|unclassified 0.4324206474 0
136 PWY-5855: ubiquinol-7 biosynthesis (prokaryotic) 0.2490218661 0
137 PWY-5855: ubiquinol-7 biosynthesis (prokaryotic)|unclassified 0.4864231295 0
138 PWY-5857: ubiquinol-10 biosynthesis (prokaryotic) 0.2490218661 0
139 PWY-5857: ubiquinol-10 biosynthesis (prokaryotic)|unclassified 0.4864231295 0
140 PWY-5941: glycogen degradation II (eukaryotic) 0.2386207694 0
141 PWY-5941: glycogen degradation II (eukaryotic)|unclassified 0.4440353865 0
142 PWY-6121: 5-aminoimidazole ribonucleotide biosynthesis I 0.3466184654 0
143 PWY-6121: 5-aminoimidazole ribonucleotide biosynthesis I|unclassified 0.5904674680 0
144 PWY-6122: 5-aminoimidazole ribonucleotide biosynthesis II 0.3314268723 0
145 PWY-6122: 5-aminoimidazole ribonucleotide biosynthesis II|unclassified 0.5780703738 0
146 PWY-6123: inosine-5'-phosphate biosynthesis I 0.6266173025 0
147 PWY-6123: inosine-5'-phosphate biosynthesis I|unclassified 0.7982649236 0
148 PWY-6124: inosine-5'-phosphate biosynthesis II 0.6826421717 0
149 PWY-6124: inosine-5'-phosphate biosynthesis II|unclassified 0.8336995150 0
150 PWY-6125: superpathway of guanosine nucleotides de novo biosynthesis II 0.7998857363 0.4768751535
151 PWY-6126: superpathway of adenosine nucleotides de novo biosynthesis II 0.7856307189 0
152 PWY-6126: superpathway of adenosine nucleotides de novo biosynthesis II|unclassified 0.8490126850 0
153 PWY-6151: S-adenosyl-L-methionine cycle I 0.6737454821 0
154 PWY-6163: chorismate biosynthesis from 3-dehydroquinate 0.4592445787 0
155 PWY-6163: chorismate biosynthesis from 3-dehydroquinate|unclassified 0.6525409722 0
156 PWY-6277: superpathway of 5-aminoimidazole ribonucleotide biosynthesis 0.3314268723 0
157 PWY-6277: superpathway of 5-aminoimidazole ribonucleotide biosynthesis|unclassified 0.5780703738 0
158 PWY-6305: putrescine biosynthesis IV 0.4091798981 0
159 PWY-6309: L-tryptophan degradation XI (mammalian, via kynurenine) 0.1343974315 0
160 PWY-6309: L-tryptophan degradation XI (mammalian, via kynurenine)|unclassified 0.3401921160 0
161 PWY-6385: peptidoglycan biosynthesis III (mycobacteria) 0.6261614182 0
162 PWY-6385: peptidoglycan biosynthesis III (mycobacteria)|unclassified 0.6847491017 0
163 PWY-6386: UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing) 0.2282059131 0
164 PWY-6386: UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)|unclassified 0.4862823810 0
165 PWY-6387: UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing) 0.5949682218 0
166 PWY-6387: UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing)|unclassified 0.6885596380 0
167 PWY-6435: 4-hydroxybenzoate biosynthesis V 0.2267113835 0
168 PWY-6435: 4-hydroxybenzoate biosynthesis V|unclassified 0.4743748539 0
169 PWY-6471: peptidoglycan biosynthesis IV (Enterococcus faecium) 0.1915932820 0
170 PWY-6471: peptidoglycan biosynthesis IV (Enterococcus faecium)|unclassified 0.4430169015 0
171 PWY-6507: 4-deoxy-L-threo-hex-4-enopyranuronate degradation 0.6802839251 0.6138469918
172 PWY-6527: stachyose degradation 0.4357088438 0
173 PWY-6527: stachyose degradation|unclassified 0.6394514786 0
174 PWY-6549: L-glutamine biosynthesis III 0.5187905090 0
175 PWY-6549: L-glutamine biosynthesis III|unclassified 0.6621423226 0
176 PWY-6595: superpathway of guanosine nucleotides degradation (plants) 0.1957070792 0
177 PWY-6595: superpathway of guanosine nucleotides degradation (plants)|unclassified 0.4328200899 0
178 PWY-6606: guanosine nucleotides degradation II 0.2100300462 0
179 PWY-6606: guanosine nucleotides degradation II|unclassified 0.4531498547 0
180 PWY-6628: superpathway of L-phenylalanine biosynthesis 0.5010631179 0
181 PWY-6630: superpathway of L-tyrosine biosynthesis 0.4060436513 0
182 PWY-6703: preQ0 biosynthesis 0.7717283843 0
183 PWY-6703: preQ0 biosynthesis|unclassified 0.7507935280 0
184 PWY-6731: starch degradation III 0.1123018447 0
185 PWY-6731: starch degradation III|unclassified 0.3308484542 0
186 PWY-6737: starch degradation V 0.3253192035 0
187 PWY-6737: starch degradation V|unclassified 0.4862456794 0
188 PWY-6769: rhamnogalacturonan type I degradation I (fungi) 0.1409857905 0
189 PWY-6769: rhamnogalacturonan type I degradation I (fungi)|unclassified 0.3545567861 0
190 PWY-6897: thiamin salvage II 0.4504159136 0
191 PWY-6897: thiamin salvage II|unclassified 0.6781354483 0
192 PWY-6936: seleno-amino acid biosynthesis 0.7463679468 0
193 PWY-6936: seleno-amino acid biosynthesis|unclassified 0.7449808595 0
194 PWY-7007: methyl ketone biosynthesis 0.1585290341 0
195 PWY-7007: methyl ketone biosynthesis|unclassified 0.3575980290 0
196 PWY-7094: fatty acid salvage 0.1448537925 0
197 PWY-7094: fatty acid salvage|unclassified 0.3591378214 0
198 PWY-7111: pyruvate fermentation to isobutanol (engineered) 0.6438814029 0
199 PWY-7111: pyruvate fermentation to isobutanol (engineered)|unclassified 0.7892059500 0
200 PWY-7115: C4 photosynthetic carbon assimilation cycle, NAD-ME type 0.3008650838 0
201 PWY-7184: pyrimidine deoxyribonucleotides de novo biosynthesis I 0.6244765971 0
202 PWY-7208: superpathway of pyrimidine nucleobases salvage 0.8699779413 0.8326116675
203 PWY-7208: superpathway of pyrimidine nucleobases salvage|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0 0.7887151367
204 PWY-7208: superpathway of pyrimidine nucleobases salvage|unclassified 0.7889809441 0
205 PWY-7211: superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis 0.4129615520 0
206 PWY-7219: adenosine ribonucleotides de novo biosynthesis 0.7924286530 0
207 PWY-7219: adenosine ribonucleotides de novo biosynthesis|unclassified 0.8967923793 0
208 PWY-7220: adenosine deoxyribonucleotides de novo biosynthesis II 0.7875449421 0.4941295971
209 PWY-7220: adenosine deoxyribonucleotides de novo biosynthesis II|g__Bacteroides.s__Bacteroides_stercoris 0 0.4619040484
210 PWY-7220: adenosine deoxyribonucleotides de novo biosynthesis II|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0 0.3767488276
211 PWY-7220: adenosine deoxyribonucleotides de novo biosynthesis II|unclassified 0.8147061027 0
212 PWY-7221: guanosine ribonucleotides de novo biosynthesis 0.8478125761 0.7732485560
213 PWY-7221: guanosine ribonucleotides de novo biosynthesis|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0 0.5731619001
214 PWY-7222: guanosine deoxyribonucleotides de novo biosynthesis II 0.7875449421 0.4941295971
215 PWY-7222: guanosine deoxyribonucleotides de novo biosynthesis II|g__Bacteroides.s__Bacteroides_stercoris 0 0.4619040484
216 PWY-7222: guanosine deoxyribonucleotides de novo biosynthesis II|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0 0.3767488276
217 PWY-7222: guanosine deoxyribonucleotides de novo biosynthesis II|unclassified 0.8147061027 0
218 PWY-7228: superpathway of guanosine nucleotides de novo biosynthesis I 0.8214158026 0.6077002683
219 PWY-7228: superpathway of guanosine nucleotides de novo biosynthesis I|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0 0.4750575774
220 PWY-7229: superpathway of adenosine nucleotides de novo biosynthesis I 0.7926894810 0
221 PWY-7229: superpathway of adenosine nucleotides de novo biosynthesis I|unclassified 0.8603900244 0
222 PWY-7234: inosine-5'-phosphate biosynthesis III 0.1394702174 0
223 PWY-7234: inosine-5'-phosphate biosynthesis III|unclassified 0.4054787249 0
224 PWY-7237: myo-, chiro- and scillo-inositol degradation 0.4937206900 0
225 PWY-7237: myo-, chiro- and scillo-inositol degradation|unclassified 0.7012383014 0
226 PWY-7242: D-fructuronate degradation 0.6896244381 0.5964915791
227 PWY-724: superpathway of L-lysine, L-threonine and L-methionine biosynthesis II 0.2877335871 0
228 PWY-724: superpathway of L-lysine, L-threonine and L-methionine biosynthesis II|unclassified 0.5548730216 0
229 PWY-7316: dTDP-N-acetylviosamine biosynthesis 0.5174282651 0
230 PWY-7316: dTDP-N-acetylviosamine biosynthesis|unclassified 0.7081786753 0
231 PWY-7357: thiamin formation from pyrithiamine and oxythiamine (yeast) 0.4569830342 0
232 PWY-7357: thiamin formation from pyrithiamine and oxythiamine (yeast)|unclassified 0.6892617825 0
233 PWY-7388: octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) 0.4546494887 0
234 PWY-7388: octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)|unclassified 0.6045879393 0
235 PWY-7398: coumarins biosynthesis (engineered) 0.0834258190 0
236 PWY-7398: coumarins biosynthesis (engineered)|unclassified 0.2678841505 0
237 PWY-7400: L-arginine biosynthesis IV (archaebacteria) 0.7262941020 0
238 PWY-841: superpathway of purine nucleotides de novo biosynthesis I 0.5350832856 0
239 PWY0-1061: superpathway of L-alanine biosynthesis 0.3320094603 0
240 PWY0-1061: superpathway of L-alanine biosynthesis|unclassified 0.5276625962 0
241 PWY0-1319: CDP-diacylglycerol biosynthesis II 0.4314096708 0
242 PWY0-1319: CDP-diacylglycerol biosynthesis II|unclassified 0.3738566572 0
243 PWY0-1586: peptidoglycan maturation (meso-diaminopimelate containing) 0.1736186426 0
244 PWY0-1586: peptidoglycan maturation (meso-diaminopimelate containing)|unclassified 0.3712304437 0
245 PWY0-162: superpathway of pyrimidine ribonucleotides de novo biosynthesis 0.7290698848 0
246 PWY0-162: superpathway of pyrimidine ribonucleotides de novo biosynthesis|unclassified 0.5623335314 0
247 PWY1F-823: leucopelargonidin and leucocyanidin biosynthesis 0.1175966331 0
248 PWY1F-823: leucopelargonidin and leucocyanidin biosynthesis|unclassified 0.3155346285 0
249 PWY4FS-7: phosphatidylglycerol biosynthesis I (plastidic) 0.5127506424 0
250 PWY4FS-8: phosphatidylglycerol biosynthesis II (non-plastidic) 0.5127506424 0
251 PWY4LZ-257: superpathway of fermentation (Chlamydomonas reinhardtii) 0.2626512224 0
252 PWY4LZ-257: superpathway of fermentation (Chlamydomonas reinhardtii)|unclassified 0.5172238273 0
253 PWY66-389: phytol degradation 0.5140188316 0
254 PWY66-389: phytol degradation|unclassified 0.5942366101 0
255 PWY66-400: glycolysis VI (metazoan) 0.6634800119 0
256 PWY66-400: glycolysis VI (metazoan)|unclassified 0.7096857422 0
257 PWY66-422: D-galactose degradation V (Leloir pathway) 0.8275835635 0.6162679643
258 PWY66-422: D-galactose degradation V (Leloir pathway)|g__Bacteroides.s__Bacteroides_stercoris 0.6690556466 0.6850888598
259 PWY66-422: D-galactose degradation V (Leloir pathway)|unclassified 0.7060002496 0
260 PYRIDNUCSYN-PWY: NAD biosynthesis I (from aspartate) 0.4207747466 0
261 PYRIDNUCSYN-PWY: NAD biosynthesis I (from aspartate)|unclassified 0.6175654679 0
262 PYRIDOXSYN-PWY: pyridoxal 5'-phosphate biosynthesis I 0.9020814293 0.6941671038
263 PYRIDOXSYN-PWY: pyridoxal 5'-phosphate biosynthesis I|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0 0.6450407623
264 PYRIDOXSYN-PWY: pyridoxal 5'-phosphate biosynthesis I|unclassified 0.9030576986 0
265 RHAMCAT-PWY: L-rhamnose degradation I 0.5108527090 0.5016200440
266 RIBOSYN2-PWY: flavin biosynthesis I (bacteria and plants) 0.2483779252 0
267 RIBOSYN2-PWY: flavin biosynthesis I (bacteria and plants)|unclassified 0.4658366070 0
268 SER-GLYSYN-PWY: superpathway of L-serine and glycine biosynthesis I 0.7510053197 0.6270534008
269 SER-GLYSYN-PWY: superpathway of L-serine and glycine biosynthesis I|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0 0.5174177685
270 SER-GLYSYN-PWY: superpathway of L-serine and glycine biosynthesis I|unclassified 0.4958048604 0
271 SO4ASSIM-PWY: sulfate reduction I (assimilatory) 0.0392546786 0
272 SO4ASSIM-PWY: sulfate reduction I (assimilatory)|unclassified 0.1972210867 0
273 THISYNARA-PWY: superpathway of thiamin diphosphate biosynthesis III (eukaryotes) 0.2015579371 0
274 THISYNARA-PWY: superpathway of thiamin diphosphate biosynthesis III (eukaryotes)|unclassified 0.4575021940 0
275 THRESYN-PWY: superpathway of L-threonine biosynthesis 0.2063425387 0
276 THRESYN-PWY: superpathway of L-threonine biosynthesis|unclassified 0.4550260621 0
277 TRNA-CHARGING-PWY: tRNA charging 0.6691861209 0
278 TRNA-CHARGING-PWY: tRNA charging|unclassified 0.6792780468 0
279 UDPNAGSYN-PWY: UDP-N-acetyl-D-glucosamine biosynthesis I 0.4158432681 0
280 UDPNAGSYN-PWY: UDP-N-acetyl-D-glucosamine biosynthesis I|unclassified 0.6234076988 0
281 VALSYN-PWY: L-valine biosynthesis 0.7506671584 0.5688165005
282 VALSYN-PWY: L-valine biosynthesis|g__Bacteroides.s__Bacteroides_thetaiotaomicron 0 0.4748410191
283 VALSYN-PWY: L-valine biosynthesis|unclassified 0.7749176544 0