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comparison graphlan.xml @ 1:5cdaa98d9376 draft

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planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/graphlan/ commit f20ebff87883fc5639f540418257ca04ce8296fb-dirty
author bebatut
date Fri, 01 Apr 2016 05:51:57 -0400
parents c5746c07ca5e
children 64e69b47b4ec
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0:c5746c07ca5e 1:5cdaa98d9376
1 <tool id="graphlan" name="GraPhlAn" version="0.1.0"> 1 <tool id="graphlan" name="GraPhlAn" version="1.0">
2 2
3 <description>to produce graphical output of an input tree</description> 3 <description>to produce graphical output of an input tree</description>
4 4
5 <requirements> 5 <requirements>
6 <requirement type="package" version="1.66">biopython</requirement> 6 <requirement type="package" version="1.66">biopython</requirement>
11 <stdio> 11 <stdio>
12 </stdio> 12 </stdio>
13 13
14 <version_command> 14 <version_command>
15 <![CDATA[ 15 <![CDATA[
16 python \${GRAPHLAN_DIR}/graphlan.py -v 16 graphlan.py -v
17 ]]> 17 ]]>
18 </version_command> 18 </version_command>
19 19
20 <command> 20 <command>
21 <![CDATA[ 21 <![CDATA[
22 python \${GRAPHLAN_DIR}/graphlan.py 22 graphlan.py
23 --format $format 23 --format $format
24 24
25 #if $dpi 25 #if $dpi
26 --dpi $dpi 26 --dpi $dpi
27 #end if 27 #end if
95 </data> 95 </data>
96 </outputs> 96 </outputs>
97 97
98 <tests> 98 <tests>
99 <test> 99 <test>
100 <param name="input_tree" value="output_modified_tree.txt"/>
101 <param name='format' value="png"/>
102 <param name="dpi" value="100"/>
103 <param name="size" value="7"/>
104 <param name="pad" value="2"/>
105 <output name="png_output_image" value="output_image.png" />
100 </test> 106 </test>
101 </tests> 107 </tests>
102 108
103 <help><![CDATA[ 109 <help><![CDATA[
104 110