Mercurial > repos > bebatut > export2graphlan

view tool_dependencies.xml @ 3:953621231a6c draft

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planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/export2graphlan/ commit f20ebff87883fc5639f540418257ca04ce8296fb-dirty
author bebatut
date Fri, 01 Apr 2016 05:51:29 -0400
parents d2b9ea71c6ed
children 4a3676d020e7
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<?xml version="1.0"?>
<tool_dependency>
    <package name="pandas" version="0.16">
        <repository changeset_revision="67abd81bd3ac" name="package_python_2_7_pandas_0_16" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
    </package>
    <package name="scipy" version="0.16">
        <repository changeset_revision="bb3303595443" name="package_python_2_7_scipy_0_16" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
    </package>
    <package name="matplotlib" version="1.4">
        <repository changeset_revision="9a4214646e88" name="package_python_2_7_matplotlib_1_4" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu" />
    </package>
    <package name="export2graphlan" version="1.0">
        <install version="1.0">
            <actions>
                <action type="shell_command">
                    hg clone https://hg@bitbucket.org/CibioCM/export2graphlan
                </action>
                <action type="move_file">
                    <source>export2graphlan.py</source>
                    <destination>$INSTALL_DIR/bin/</destination>
                </action>
                <action type="move_directory_files">
                    <source_directory>hclust2</source_directory>
                    <destination_directory>$INSTALL_DIR/bin/hclust2/</destination_directory>
                </action>
                <action type="set_environment">
                    <environment_variable action="set_to" name="EXPORT2GRAPHLAN_DIR">$INSTALL_DIR/</environment_variable>
                    <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin/</environment_variable>
                    <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/</environment_variable>
                </action>
            </actions>
        </install>
        <readme />
    </package>
</tool_dependency>