Mercurial > repos > bebatut > data_manager_metaphlan_database_downloader

comparison data_manager_conf.xml @ 0:0fa1c6975721 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 83aed19c6cdf00f3133eb80a69cba0074ca244cc-dirty"
author bebatut
date Wed, 10 Mar 2021 09:48:09 +0000
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-1:000000000000 0:0fa1c6975721
1 <?xml version="1.0"?>
2 <data_managers>
3 <data_manager tool_file="data_manager/data_manager_metaphlan_download.xml" id="data_manager_metaphlan_download" >
4 <data_table name="metaphlan_database"> <!-- Defines a Data Table to be modified. -->
5 <output> <!-- Handle the output of the Data Manager Tool -->
6 <column name="value" /> <!-- columns that are going to be specified by the Data Manager Tool -->
7 <column name="name" /> <!-- columns that are going to be specified by the Data Manager Tool -->
8 <column name="dbkey" /> <!-- columns that are going to be specified by the Data Manager Tool -->
9 <column name="path" output_ref="out_file" >
10 <move type="directory">
11 <source>${path}</source>
12 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">metaphlan/data/${dbkey}</target>
13 </move>
14 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/metaphlan/data/${dbkey}</value_translation>
15 <value_translation type="function">abspath</value_translation>
16 </column>
17 </output>
18 </data_table>
19 </data_manager>
20 </data_managers>
21