Mercurial > repos > bebatut > data_manager_metaphlan_database_downloader

annotate data_manager_conf.xml @ 2:add43d1fb88d draft default tip

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 83aed19c6cdf00f3133eb80a69cba0074ca244cc-dirty"
author bebatut
date Wed, 10 Mar 2021 12:02:48 +0000
parents 0fa1c6975721
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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0fa1c6975721 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 83aed19c6cdf00f3133eb80a69cba0074ca244cc-dirty"
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1 <?xml version="1.0"?>
0fa1c6975721 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 83aed19c6cdf00f3133eb80a69cba0074ca244cc-dirty"
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2 <data_managers>
0fa1c6975721 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 83aed19c6cdf00f3133eb80a69cba0074ca244cc-dirty"
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3 <data_manager tool_file="data_manager/data_manager_metaphlan_download.xml" id="data_manager_metaphlan_download" >
0fa1c6975721 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 83aed19c6cdf00f3133eb80a69cba0074ca244cc-dirty"
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4 <data_table name="metaphlan_database"> <!-- Defines a Data Table to be modified. -->
0fa1c6975721 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 83aed19c6cdf00f3133eb80a69cba0074ca244cc-dirty"
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5 <output> <!-- Handle the output of the Data Manager Tool -->
0fa1c6975721 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 83aed19c6cdf00f3133eb80a69cba0074ca244cc-dirty"
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6 <column name="value" /> <!-- columns that are going to be specified by the Data Manager Tool -->
0fa1c6975721 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 83aed19c6cdf00f3133eb80a69cba0074ca244cc-dirty"
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7 <column name="name" /> <!-- columns that are going to be specified by the Data Manager Tool -->
0fa1c6975721 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 83aed19c6cdf00f3133eb80a69cba0074ca244cc-dirty"
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8 <column name="dbkey" /> <!-- columns that are going to be specified by the Data Manager Tool -->
0fa1c6975721 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 83aed19c6cdf00f3133eb80a69cba0074ca244cc-dirty"
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9 <column name="path" output_ref="out_file" >
0fa1c6975721 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 83aed19c6cdf00f3133eb80a69cba0074ca244cc-dirty"
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10 <move type="directory">
0fa1c6975721 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 83aed19c6cdf00f3133eb80a69cba0074ca244cc-dirty"
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11 <source>${path}</source>
0fa1c6975721 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 83aed19c6cdf00f3133eb80a69cba0074ca244cc-dirty"
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12 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">metaphlan/data/${dbkey}</target>
0fa1c6975721 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 83aed19c6cdf00f3133eb80a69cba0074ca244cc-dirty"
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13 </move>
0fa1c6975721 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 83aed19c6cdf00f3133eb80a69cba0074ca244cc-dirty"
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14 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/metaphlan/data/${dbkey}</value_translation>
0fa1c6975721 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 83aed19c6cdf00f3133eb80a69cba0074ca244cc-dirty"
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15 <value_translation type="function">abspath</value_translation>
0fa1c6975721 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 83aed19c6cdf00f3133eb80a69cba0074ca244cc-dirty"
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16 </column>
0fa1c6975721 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 83aed19c6cdf00f3133eb80a69cba0074ca244cc-dirty"
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17 </output>
0fa1c6975721 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 83aed19c6cdf00f3133eb80a69cba0074ca244cc-dirty"
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18 </data_table>
0fa1c6975721 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 83aed19c6cdf00f3133eb80a69cba0074ca244cc-dirty"
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19 </data_manager>
0fa1c6975721 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 83aed19c6cdf00f3133eb80a69cba0074ca244cc-dirty"
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20 </data_managers>
0fa1c6975721 "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_metaphlan_database_downloader commit 83aed19c6cdf00f3133eb80a69cba0074ca244cc-dirty"
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