Mercurial > repos > bebatut > convert_extract_sequence_file

annotate test-data/input_sequence_file.fasta @ 0:b4cf778be846 draft

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planemo upload commit 23ef4b1699065b4f6200c58328bfecfb33dd7fd1-dirty
author bebatut
date Tue, 26 Apr 2016 08:17:42 -0400
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b4cf778be846 planemo upload commit 23ef4b1699065b4f6200c58328bfecfb33dd7fd1-dirty
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1 >HWI-M00234:263:000000000-ADM55:1:1101:21704:2233 1:N:0:ATCACG
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2 GTGTACAAGGCCCGGGAACGTATTCACCGCGGCATGCTGATCCGCGATTACTAGCGATTC
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3 CAACTTCATACAGGCGGGTTTCAGCC
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4 >HWI-M00234:263:000000000-ADM55:1:1101:21334:2699 1:N:0:ATCACG
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5 CTTTTGACGGCCTTTTTGTTGTCTTCTGAATTTTGTTTTTTTCGGTTGTAACATAATTCC
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6 TAAAAATCAAATTCGTTAGCGATTATTTTTCTTTCTTTTGAAGTTCTTTCCGCCATTGTT
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7 TCCGCTATTGCTTCCACGACC
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8 >HWI-M00234:263:000000000-ADM55:1:1101:13968:2885 1:N:0:ATCACG
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9 CCCACTGCTGCCTCCCGTAGGAGCCTGGACCGTGTCTCAGTTCCAATGTGGCCGATCACC
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10 CTCTCAGGTCGGCTACCCATCGTTGCCCTGGTAAGCCATTACCCTACCAACTAGCTAATG
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11 GGACGCGGGCACATCTCAAAGCGGATTACCCCTTTGGTTAAAGTTTAATGCGAAACTCTA
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12 ACTTTATGCGTTATTAACCCTCCTTTCGGAGGGCTATTCCCCTCTTTGATGCAGGTTGCC
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13 CACGTGTTACTCACCCGTCCGCCGCTAATCCACTTCCCGAAGGCAGATTCAACCCTCGAT
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14 >HWI-M00234:263:000000000-ADM55:1:1101:11873:2948 1:N:0:ATCACG
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15 CCCCGTTACATCTTCCGCGCAGGAAGACTCGATCAGTGAGCTATTACGCTTTCTTTGAAG
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16 GATGGCTGCTTCTAAGCCAACTTCCTGACTGTCTTAGCCTTCCCACTTCGTTTTCCACTT
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17 AGTCAATATTAGGGACCTTAGCCGGCGGTCTGGGTTGTTTCCCTCTTGAGTCCGGACGTT
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18 AGCACCCGGTGCTCTGTCCCCCGTGCCCAAACTTCCAAGTATTCGGAGTTTGCCATGGTT
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19 TGGTAAGACGCTATGTCCCCCTAACCATAACAGTGTTCTACCCTCTGAACACATACTCGA
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20 >HWI-M00234:263:000000000-ADM55:1:1101:7855:3066 1:N:0:ATCACG
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21 CGTCAATCTTCCAACGCCCACGGCAGATAGGGACAAAACTGTCTCACGACGTTTTAAACC
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22 CAGCTCACGTACCTCTTTAAATGGCGAACAGCCATACCCTTGGGACCGGCTACAGC
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23 >HWI-M00234:263:000000000-ADM55:1:1101:24817:3238 1:N:0:ATCACG
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24 CCCGTGACCAGATTCATGGCCGCCGGTTAGAACCCCAGTACTGTCAGGGTGGTATCCCAA
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25 GGA
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26 >HWI-M00234:263:000000000-ADM55:1:1101:17179:3527 1:N:0:ATCACG
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27 GTGCTTATTTCACTTCCTCAAAATCAGCATCCTGCACATTATCGCCATGCTTT
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28 >HWI-M00234:263:000000000-ADM55:1:1101:21254:3571 1:N:0:ATCACG
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29 GTCGCGGGGAAGATCAACTCCTGCAATTCGAGCCATACCAATTACCTCCTAGCGCCCTGA
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30 CGCTGTTTATGACGAGGATCGCGGCTGCAGATGACGCGAATGACGCCATTGCGCTTGATC
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31 ACTCGGCAATACTCACAAATGGGTTTAACAGATTATCTAACCTTCATAGTTTGCACACTC
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32 CTCATGGACATTCC
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33 >HWI-M00234:263:000000000-ADM55:1:1101:16569:3709 1:N:0:ATCACG
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34 CCCGTCAATTCCTTTGAGTTTCATTCTTGCGAACGTACTCCCCAGGTGGAATACTTATTG
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35 CGTTTGCTGCGGCACCGAATGGCTTTGCCACCCGACACCTAGTATTCATCGTTTACGGCG
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36 TGGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCTCAACGTCAGGA
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37 TCGGAAGAGCACACGTCTGAACTCCAGTCACATCCCG
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38 >HWI-M00234:263:000000000-ADM55:1:1101:22403:3828 1:N:0:ATCACG
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39 CCCGGACATCTTCGGCGCAGGATCTCTTGACTAGTGAGCTATTACGCACTCTTTAAATGA
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40 GTGGCTGCTTCTAAGCCAACATCCTAGTTGTCTTAGAAATCCCACATCCTTTTCCACTTA
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41 ACTTACACTTTGGGACCTTAGCTGATGAGATCGGAAGAGCACACGTCTGAACTCCAGTCA
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42 CATCACGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAATATCAATCAAACACAC
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43 ACACACCAGCTTAC
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44 >HWI-M00234:263:000000000-ADM55:1:1101:7508:4067 1:N:0:ATCACG
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45 GGTGCACTAGGATCGTAGTTGGCTACTTTCCCGTTTTCAATGTATACGCAAGGTACACGG
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46 TCAGCGGTAGCTGCCATAATGTAATGGTAGTCAAATCCTAAGTCTCCCAATGCACATGGC
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47 AGTGGAGCGTTCCAATCTTGTGTACCGGCTTTGTCTCCTAATCCCAAGTGCCATTTTCCG
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48 ATAGCTCCGGTAGCATAACCGGTACTTTTGAACATAACCGCCATGGTATATTGTTCGGGA
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49 CGGATAATCATTCCGGCATTTCCGGCAGCTACG
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50 >HWI-M00234:263:000000000-ADM55:1:1101:26232:4161 1:N:0:ATCACG
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51 CTCTTCTTAAGCTCGAACAGCTTCTTCAGTCTTACCTGCCATTTCATCTAAAATTTTTAA
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52 AGCTCGCTCTAAAACAGTAGTATCATCAATCATAACCAATCCACCATCTGGTCCAGGTTC
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53 CAAGTGAATCCCAACACTTTTCCCCTCCTTAAAATTGTGTCCACCGAAAAAATTTCTTAC
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54 AGTGTCAACATTCAGTCCAAGTTCATCGGCTATTCTATGCATACTACCACTAGGCAATGA
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55 GT
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56 >HWI-M00234:263:000000000-ADM55:1:1101:23151:4189 1:N:0:ATCACG
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57 GCGGATTTTCTCGGGAGTATGATTACCCACACTATTGGATTCTTCCGAAGAAGACTCCAT
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58 ACTACCAAGTTCAGCTCGGATGGTGGATTTGCCTGCCAAGATCAGAAGAGCACACGTCTG
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59 AACTCCAGTCACATCACGACTTCGTATGCCGTATTCTGCTTGAAAAAAACAATGAAAACT
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60 AGTCACCGATGACTCACGTTCGCTGAACATTATCTGACAACTAGCTTAACAATGGACATG
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61 CTTAGCACTGACAACCAGACG
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62 >HWI-M00234:263:000000000-ADM55:1:1101:17148:4803 1:N:0:ATCACG
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63 CCCTTTTCGGCAATGGCGATGTTACGGTACATAAGAGCGATTTCGGGGAAACCTTCTTCG
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64 TCTGCAATATCAGCAAACTTAGGATAATCCAATGA
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65 >HWI-M00234:263:000000000-ADM55:1:1101:8939:4808 1:N:0:ATCACG
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66 CCACAGTTCTGTCATATCGCAGTACAGGAATCTCAACCTGTTGTCCATCGGCTACGGCTC
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67 TCGCCCTCGCCTTAGGCCCCGACTTACCCAGGGCAGATCAGCTTTA
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68 >HWI-M00234:263:000000000-ADM55:1:1101:11727:5103 1:N:0:ATCACG
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69 CTCCCGTATAGGATGGATCGAAAGCAATCGTCAGGAATCCACGTTCTGCCAATGTCTGCG
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70 CATACAAGCCCGAAGCTTGTTCCTTCACGGCACCAAATGGGCCACTGATGGCAATGGCAG
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71 GCAATTTACCCGTCACATTCTTGGGTACATACAAATCGGCGGCAAGTGTAATGCCGTAAC
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72 GGTTGTGGAAAG
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73 >HWI-M00234:263:000000000-ADM55:1:1101:15029:5173 1:N:0:ATCACG
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74 GGCCTATTCTCTGCGGCCGCCTTTCGGCGGCACCCCTTCTCCCGAAGTTACGGGGTCATT
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75 TTGCCGAGTTCCTTAACAATGCTTCTTCCGTCGGCCTTAGGATTCTCTCCTCATCCACCT
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76 GTGTCGGTTTACGGTACGGGTACAATATAAACAATAGCGGCTTTTCTTGACGGCCGGCTC
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77 ATGGGCTTCCCTACTTTAGT
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78 >HWI-M00234:263:000000000-ADM55:1:1101:7330:5248 1:N:0:ATCACG
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79 TGTGTATGAATGAGCGGCTACAGGCTTAGTCGATTTCTTTACTGCGCAGAAGCGGGACTG
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80 TGACCGACAAAACAGCCGTCGCCTCTCTACGTTCCGGGACCATACGCCGCTCGCAGTGAT
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81 TGACCCTTACAACCTTGCGGGCGCTCTC
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82 >HWI-M00234:263:000000000-ADM55:1:1101:18630:5353 1:N:0:ATCACG
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83 GGCGTGTTCTGCCAAAATAGTGCTGGGCAATATACGACATAGAAGCGAAAGGCAATACTT
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84 TTTCTAAGGCCTGCCTGATTTCTACTGTTTTCACAATGGCTTGGGCTTCATTGATTGATT
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85 GCCTGGCACCATCTTGGAATGCTTGCGCAAACGCTTTTTTATCCTCCGGTGAAAGCGTCT
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86 GCAGAAAAGCCCTGAAACGTTTTTTATGGTCGGCCACTTCCTCAGGAGTATTG
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87 >HWI-M00234:263:000000000-ADM55:1:1101:11799:5476 1:N:0:ATCACG
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88 CCTAAATTTTCGAGTATAAGCAGGACCGAAGCCACCAACTTATACCTTATCCTCTAAATT
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89 TTCGTAAGAGACATGAAGCGGATCTCTAACTATTCCCGATTTTACTGCACCACTTGATCA
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90 AACGCTTCGGAACAAGAGCTTTTGAGTGATGTCTCGTTTCCACCACTTTGGCAGAAATAA
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91 AGCTAATCTACTATGATTCGATTAAGCAGCAAGAGCATAATTTTCGTTGCCAGATAAAAT
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92 TT
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93 >HWI-M00234:263:000000000-ADM55:1:1101:11348:5668 1:N:0:ATCACG
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94 GCCTAAATTTTCGTGCAGCGGCAGAACCAAAGCCATCAACCGTTGCCTTATCCTCTAAAT
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95 TTTCACCCGCGCCACGAGGCTGACACGAACTATCCCCGATTTGACTGCACCACTTTATCG
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96 GAATGCTTCGGAGCAACAGCTTCCGAGTGATGTCACGTCCCAGCACCTGGTGCCGGGATT
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97 AAGCTTCAATCTACTATACTTCGATTAAGCAGCGAGAGCGTAACGAGTTTCGCCAGATAA
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98 AATTTTGAGGACTGAGATTAAAGTGAAAATC
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99 >HWI-M00234:263:000000000-ADM55:1:1101:25874:5826 1:N:0:ATCACG
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100 CCTGCAGTGGATAGGGACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTACCTCT
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101 TTAATGGGCGAACAGCCCAACCCTTGGGACCTTCTCCAGCCCCAGGATGAGATGAGCCGA
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102 CATCGAGGTGCCAAACTTTCCCGCCGATATGGACGCCCGGGCAAAATCAGCTTGTTATCC
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103 CCAGGGTAGCTTTTATCCGTTGAGCGACGACCCTTCCATTCGGAATCGCCGGAATACTAT
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104 GCCCTGCTTTCGCACCTGCCCAACCAGTCCGCCCAGCAGTTAAG
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105 >HWI-M00234:263:000000000-ADM55:1:1101:26932:5861 1:N:0:ATCACG
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106 AGCGTCAGTTACAGTCCAGAAAGCCGCCTTCGCCACTGGTGTTCTTCCTAATCTCTACGC
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107 ATTTCACCGCTACACTAGGAATTCCGCTTTCCTCTCCTGCACTCTAGATATCCAGTTTGG
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108 AATGCAGCCCCCAGGTTAAGCCCGGGGATTTCACATCCCACTTAAACATCCGCCTACGCA
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109 CCCTTTACCACCAGTAAATCCGGACAACGCTCGCCACCTACGTATTACCGCGGCTGCTGG
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110 CACGTAGTTAGCCGTGGCTTCCTCCTCTGGTACCTTCATTATCGTCCCCGAAACC
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111 >HWI-M00234:263:000000000-ADM55:1:1101:14154:5990 1:N:0:ATCACG
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112 GTGGGATGTCAAGGTAAGCGGCGGCAGCCTTGGCTACAGCAAGAGATACGCCGAGGATGG
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113 CATTGGCACCCAGATTGGCTTTCGTTTTGGTTCCGTCCAGTGCAAGCATGGCATGGTCGA
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114 TACCCATCTGGTCGAGGGCGGACATACCGATGAGCTTGGGAGCAATGATATTATTGATAT
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diff changeset
115 TGTCCACGGCTTTCAGGAC
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116 >HWI-M00234:263:000000000-ADM55:1:1101:25022:6229 1:N:0:ATCACG
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117 CCCGAGAACGTATTCACCGCAACATTGCTGATTTGCGATTACTAGTGATTCCAACTTCAT
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118 GTACTCGAGTTGCAGAGTACAATCCGAACTACGAACAGCTTTCTGAGGTTTGCTCCTCCT
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119 CGCAGATTTGCTGATCGGAAGAGCACACGTCTGAACTCCAGTCACATC
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120 >HWI-M00234:263:000000000-ADM55:1:1101:21023:6286 1:N:0:ATCACG
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121 GTGTACAAGGCCCGGGAACGTATTCACCGCGCCGTGGCTGATGCGCGATTACTAGCGAAT
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122 CCAGCTTCATGGAGTCGGGTTGCAGACTCCAATCCGAACTGAGAGAGGCTTTAGGGATTA
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123 GCATCACGTCGCCGTGTAGCTGCCTTCTGTACCCCCCATTGTAACACGTGTGTAGCCCCG
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124 GACGTAAGGGCCGTGCTGATTTGCCGTCATCCCCACCTTCCTCAC
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125 >HWI-M00234:263:000000000-ADM55:1:1101:8138:6336 1:N:0:ATCACG
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126 TGTGTACAAGGCCCGGGAACGTATTCACCGCGACATTCTGATTCGCGATTACTAGCAACT
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127 CCAGCTTCATGTAGGCGAGTTGCAGCCTACAATCCGAACTGAGATAGGTTTTATAAGTTT
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128 TGCTCCACCTCACGGTCTT
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129 >HWI-M00234:263:000000000-ADM55:1:1101:11055:6543 1:N:0:ATCACG
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130 CCTGGACATTTTCGGCGCAGGACCTCCCGACCAGTGAGCTATTACGCACTCTTTGACTGT
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131 GTGGCTGCTTCTGAGCCAACATCCTGGTTGACTTTGAAATCTCACATACTTTTCCACTTA
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132 ACACGCACTTTGGGACCTTAGCTGGAGGTCTTGGCTCTTTCCTTTTTGCCTATCCAACTT
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133 ATCTCGTATAGTCTGACTCCCGG
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134 >HWI-M00234:263:000000000-ADM55:1:1101:24980:6575 1:N:0:ATCACG
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135 GCCATTTATCTACGCCTGTTGTCACCAACAGGCTCTAGCGGTCTACCCTCCGACGTGGGG
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136 CGAGCAACCCTCATA
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137 >HWI-M00234:263:000000000-ADM55:1:1101:7596:6682 1:N:0:ATCACG
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138 GCCCCCGTCAATTCCTTTGAGTTTCACCGTTGCCGGCGTACTCCCCAGGTGGAATACTTA
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139 ACGCTTTCGCTTGGCGGCTGACAATGTATCGCCAACCGCGAGTATTCATCAGATCGGAAG
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140 AGCACACGTCTGAACTCCAGTCACATCCCGATCTCGTATGCCGTCCTCGGCTTGAAAAAA
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141 AAAAATATAAACCATGATGAATTTCGAACACTCACGACCACACACTAAGCGTCGACGTA
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142 >HWI-M00234:263:000000000-ADM55:1:1101:24419:6736 1:N:0:ATCACG
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143 CGGGCGTTGGCAAGTACGTTATATCACTTACCCACGCTCGATTCAGAACCCCAGGAGTAA
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144 ATGCTCGTTTTAAGAGGTTGGGATACACAGGCATGGTGTGATTACTGTCGGTGGTTTTTA
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145 CGGTTCGCTTAAAAAAGCGGTAACCAATGATGCCATTAAAGCGAAGGATAGCGCGTAAAC
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146 GTTTGACACCAACTTTCACTCCACGGTGTTGCATCAAAGC
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147 >HWI-M00234:263:000000000-ADM55:1:1101:5068:6755 1:N:0:ATCACG
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148 GCAGCGGCAGAACCAAAGCCATCAACCGTTGCCTTATCCTCTAAATTTTCACCCGCGCCA
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149 CGAGGCTGACACGAACTATCCCCGATTTGACTGCACCACTTTATCGGAATGCTTCGGAGC
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150 AACAGCTTCCGAGTGATGTCACGTCCCAGCACCTGGTGCCGGGATTAAGCTTCAATCTAC
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151 TATACTTCGATTAAGCAGCGAGAGCGTAACGAGTTTCGCCAGATAAAATTTTGAGGACTG
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152 AGATTAAAGTGCAAATC
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153 >HWI-M00234:263:000000000-ADM55:1:1101:21477:6796 1:N:0:ATCACG
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154 CCCCACTGCTGCTTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTT
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diff changeset
155 CCTCTCAGAACCCCTATCCATCGTTGACTAGGTGGGCCGTTACCCCGCCTACTATCTAAT
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156 GGAACGCATCCCCATCGTCTACCGGAAAATACCTT
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157 >HWI-M00234:263:000000000-ADM55:1:1101:12483:6880 1:N:0:ATCACG
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diff changeset
158 CTCCTTGTCTGCCTTCGATTACGGCATTTGCAATCGTTCCTGTAAGTAGTTTTACAGCTC
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159 TAATGGCATCGTCATTCCCTGGTATTACGTAGTCTATTTCATCAGGATCACAGTTAGTAT
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160 CAACTATTGCTACAACTGGTATTCCTAATATCTTCGCTTCATTTACTGCAATTCTTTCTT
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161 TTCTTGGATCTACAACAAATAATACATCAGGAAGACCACCCATATCTTGAATGCCACCTA
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162 AAAACTTTTCAA
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163 >HWI-M00234:263:000000000-ADM55:1:1101:27958:6935 1:N:0:ATCACG
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164 CCATTCGGAAATCCGCGGATCAAAGGTCATTTGCACCTACCCGCAGCTTATCGCAGCTTA
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165 TCACGTCCTTCATCGCCTCCGAGAGCCAAGAGATCGGAAGAGCACACGTCTGAACTCCAG
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166 TCACATCACGATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAACCCACAAATTCACACT
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167 ACACACCCACCTCCCATCACGCATCTCTTTTGTCCGAGTCACGCTGCACGCTACCTGCAC
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diff changeset
168 ACTACCTGCCTCAGTTACATCTTTTTACTCAATGTCCCACCATTTATCAC
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169 >HWI-M00234:263:000000000-ADM55:1:1101:6151:7404 1:N:0:ATCACG
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170 GCACGTAGTTAGCCGGGGCTTCCTCCTAAGGTACCGTCATTATCGTCCCTTAGGACAGAG
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171 CTTTACGATCCGAAAACCTTCATCGCTCACGCGGCGTCGCTGCATCAGAGTTCCCTCCAT
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172 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG
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173 TGGCCGTTCACCCTCCCAGGCCGGCTACCCATCGTCGCCTTGGTTAGCTATTACCTCCCC
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174 AACTAGCTAATGGGACGCGAGTCCAGCTTATACCACTTAACCGCTTTTGCTTGAAAATCA