Mercurial > repos > bcclaywell > microbiome_pplacer_suite

annotate preprocessing-wrapper.sh @ 3:221a97bf686d draft

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author bcclaywell
date Wed, 25 Mar 2015 16:39:10 -0400
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1 #!/bin/bash
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3 source $1
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5 deduplicate_sequences.py \
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6 --split-map ${SPLIT_MAP} \
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7 --deduplicated-sequences-file ${DEDUP_INFO} \
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8 ${INPUT_SEQS} \
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9 ${DEDUP_SEQS}