Mercurial > repos > bcclaywell > argo_navis
annotate venv/lib/python2.7/site-packages/planemo/tools.py @ 0:d67268158946 draft
planemo upload commit a3f181f5f126803c654b3a66dd4e83a48f7e203b
author | bcclaywell |
---|---|
date | Mon, 12 Oct 2015 17:43:33 -0400 |
parents | |
children |
rev | line source |
---|---|
0
d67268158946
planemo upload commit a3f181f5f126803c654b3a66dd4e83a48f7e203b
bcclaywell
parents:
diff
changeset
|
1 import sys |
d67268158946
planemo upload commit a3f181f5f126803c654b3a66dd4e83a48f7e203b
bcclaywell
parents:
diff
changeset
|
2 import traceback |
d67268158946
planemo upload commit a3f181f5f126803c654b3a66dd4e83a48f7e203b
bcclaywell
parents:
diff
changeset
|
3 from planemo.io import error |
d67268158946
planemo upload commit a3f181f5f126803c654b3a66dd4e83a48f7e203b
bcclaywell
parents:
diff
changeset
|
4 |
d67268158946
planemo upload commit a3f181f5f126803c654b3a66dd4e83a48f7e203b
bcclaywell
parents:
diff
changeset
|
5 from galaxy.tools import loader_directory |
d67268158946
planemo upload commit a3f181f5f126803c654b3a66dd4e83a48f7e203b
bcclaywell
parents:
diff
changeset
|
6 |
d67268158946
planemo upload commit a3f181f5f126803c654b3a66dd4e83a48f7e203b
bcclaywell
parents:
diff
changeset
|
7 is_tool_load_error = loader_directory.is_tool_load_error |
d67268158946
planemo upload commit a3f181f5f126803c654b3a66dd4e83a48f7e203b
bcclaywell
parents:
diff
changeset
|
8 |
d67268158946
planemo upload commit a3f181f5f126803c654b3a66dd4e83a48f7e203b
bcclaywell
parents:
diff
changeset
|
9 |
d67268158946
planemo upload commit a3f181f5f126803c654b3a66dd4e83a48f7e203b
bcclaywell
parents:
diff
changeset
|
10 def load_tool_elements_from_path(path, recursive, register_load_errors=False): |
d67268158946
planemo upload commit a3f181f5f126803c654b3a66dd4e83a48f7e203b
bcclaywell
parents:
diff
changeset
|
11 return loader_directory.load_tool_elements_from_path( |
d67268158946
planemo upload commit a3f181f5f126803c654b3a66dd4e83a48f7e203b
bcclaywell
parents:
diff
changeset
|
12 path, |
d67268158946
planemo upload commit a3f181f5f126803c654b3a66dd4e83a48f7e203b
bcclaywell
parents:
diff
changeset
|
13 _load_exception_handler, |
d67268158946
planemo upload commit a3f181f5f126803c654b3a66dd4e83a48f7e203b
bcclaywell
parents:
diff
changeset
|
14 recursive=recursive, |
d67268158946
planemo upload commit a3f181f5f126803c654b3a66dd4e83a48f7e203b
bcclaywell
parents:
diff
changeset
|
15 register_load_errors=register_load_errors, |
d67268158946
planemo upload commit a3f181f5f126803c654b3a66dd4e83a48f7e203b
bcclaywell
parents:
diff
changeset
|
16 ) |
d67268158946
planemo upload commit a3f181f5f126803c654b3a66dd4e83a48f7e203b
bcclaywell
parents:
diff
changeset
|
17 |
d67268158946
planemo upload commit a3f181f5f126803c654b3a66dd4e83a48f7e203b
bcclaywell
parents:
diff
changeset
|
18 |
d67268158946
planemo upload commit a3f181f5f126803c654b3a66dd4e83a48f7e203b
bcclaywell
parents:
diff
changeset
|
19 def _load_exception_handler(path, exc_info): |
d67268158946
planemo upload commit a3f181f5f126803c654b3a66dd4e83a48f7e203b
bcclaywell
parents:
diff
changeset
|
20 error("Error loading tool with path %s" % path) |
d67268158946
planemo upload commit a3f181f5f126803c654b3a66dd4e83a48f7e203b
bcclaywell
parents:
diff
changeset
|
21 traceback.print_exception(*exc_info, limit=1, file=sys.stderr) |
d67268158946
planemo upload commit a3f181f5f126803c654b3a66dd4e83a48f7e203b
bcclaywell
parents:
diff
changeset
|
22 |
d67268158946
planemo upload commit a3f181f5f126803c654b3a66dd4e83a48f7e203b
bcclaywell
parents:
diff
changeset
|
23 |
d67268158946
planemo upload commit a3f181f5f126803c654b3a66dd4e83a48f7e203b
bcclaywell
parents:
diff
changeset
|
24 __all__ = ["load_tool_elements_from_path", "is_tool_load_error"] |