diff BEDTools-Version-2.14.3/README.rst @ 1:bec36315bd12 default tip

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author aaronquinlan
date Sat, 19 Nov 2011 14:17:03 -0500
parents dfcd8b6c1bda
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--- a/BEDTools-Version-2.14.3/README.rst	Thu Nov 03 10:25:04 2011 -0400
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-==============================
-          BEDTools         
-==============================
-
-Created by Aaron Quinlan Spring 2009.
-
-Copyright 2009,2010,2011 Aaron Quinlan. All rights reserved.
-
-Stable releases: http://code.google.com/p/bedtools
-
-Repository:      https://github.com/arq5x/bedtools
-
-Released under GNU public license version 2 (GPL v2).
-
-
-Summary
--------
-BEDTools is a collection of utilities for comparing, summarizing, and 
-intersecting genomic features in BED, GTF/GFF, VCF and BAM formats. 
-
-
-Manual
-------
-See the extensive PDF manual included at: http://code.google.com/p/bedtools/downloads/detail?name=BEDTools-User-Manual.v4.pdf.
-
-This manual covers many common usage examples.  There are also examples available at:
-http://code.google.com/p/bedtools/wiki/Usage
-http://code.google.com/p/bedtools/wiki/UsageAdvanced
-
-Installation
-------------
-Git
-...
-git clone git://github.com/arq5x/bedtools.git
-
-Download tarball - that big gray button on the upper right.
-...........................................................
-#. Unpack the source downloaded tarball.
-#. cd into the expanded folder.
-#. Type "make clean" and hit enter.
-#. Type "make all" and hit enter.
-#. If you encountered no errors, then all of the BED Tools should now be in bin/
-  If not, try to troubleshoot then email me: aaronquinlan at gmail dot com
-#. Copy the files in bin/ to ~/bin or if you have the privileges, to /usr/local/bin.
-#. Use the tools.
-
-