Mercurial > repos > aaronquinlan > multi_intersect
diff BEDTools-Version-2.14.3/README.rst @ 1:bec36315bd12 default tip
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| author | aaronquinlan |
|---|---|
| date | Sat, 19 Nov 2011 14:17:03 -0500 |
| parents | dfcd8b6c1bda |
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--- a/BEDTools-Version-2.14.3/README.rst Thu Nov 03 10:25:04 2011 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,47 +0,0 @@ -============================== - BEDTools -============================== - -Created by Aaron Quinlan Spring 2009. - -Copyright 2009,2010,2011 Aaron Quinlan. All rights reserved. - -Stable releases: http://code.google.com/p/bedtools - -Repository: https://github.com/arq5x/bedtools - -Released under GNU public license version 2 (GPL v2). - - -Summary -------- -BEDTools is a collection of utilities for comparing, summarizing, and -intersecting genomic features in BED, GTF/GFF, VCF and BAM formats. - - -Manual ------- -See the extensive PDF manual included at: http://code.google.com/p/bedtools/downloads/detail?name=BEDTools-User-Manual.v4.pdf. - -This manual covers many common usage examples. There are also examples available at: -http://code.google.com/p/bedtools/wiki/Usage -http://code.google.com/p/bedtools/wiki/UsageAdvanced - -Installation ------------- -Git -... -git clone git://github.com/arq5x/bedtools.git - -Download tarball - that big gray button on the upper right. -........................................................... -#. Unpack the source downloaded tarball. -#. cd into the expanded folder. -#. Type "make clean" and hit enter. -#. Type "make all" and hit enter. -#. If you encountered no errors, then all of the BED Tools should now be in bin/ - If not, try to troubleshoot then email me: aaronquinlan at gmail dot com -#. Copy the files in bin/ to ~/bin or if you have the privileges, to /usr/local/bin. -#. Use the tools. - -
