--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/BEDTools-Version-2.14.3/src/complementBed/complementBed.h	Thu Nov 03 10:25:04 2011 -0400
@@ -0,0 +1,47 @@
+/*****************************************************************************
+  complementBed.h
+
+  (c) 2009 - Aaron Quinlan
+  Hall Laboratory
+  Department of Biochemistry and Molecular Genetics
+  University of Virginia
+  aaronquinlan@gmail.com
+
+  Licenced under the GNU General Public License 2.0 license.
+******************************************************************************/
+#include "bedFile.h"
+#include "genomeFile.h"
+
+#include <vector>
+#include <bitset>
+#include <algorithm>
+#include <iostream>
+#include <fstream>
+#include <limits.h>
+#include <stdlib.h>
+
+using namespace std;
+
+
+//************************************************
+// Class methods and elements
+//************************************************
+class BedComplement {
+
+public:
+
+  // constructor
+  BedComplement(string &bedFile, string &genomeFile);
+
+  // destructor
+  ~BedComplement(void);
+
+  void ComplementBed();
+
+private:
+
+    string _bedFile;
+    string _genomeFile;
+    BedFile *_bed;
+    GenomeFile *_genome;
+};