Mercurial > repos > aaronquinlan > multi_intersect

comparison BEDTools-Version-2.14.3/src/closestBed/Makefile @ 1:bec36315bd12 default tip

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author aaronquinlan
date Sat, 19 Nov 2011 14:17:03 -0500
parents dfcd8b6c1bda
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0:dfcd8b6c1bda 1:bec36315bd12
1 UTILITIES_DIR = ../utils/
2 OBJ_DIR = ../../obj/
3 BIN_DIR = ../../bin/
4
5 # -------------------
6 # define our includes
7 # -------------------
8 INCLUDES = -I$(UTILITIES_DIR)/bedFile/ -I$(UTILITIES_DIR)/lineFileUtilities/ -I$(UTILITIES_DIR)/version/ -I$(UTILITIES_DIR)/gzstream/ -I$(UTILITIES_DIR)/fileType/
9 # ----------------------------------
10 # define our source and object files
11 # ----------------------------------
12 SOURCES= closestMain.cpp closestBed.cpp
13 OBJECTS= $(SOURCES:.cpp=.o)
14 _EXT_OBJECTS=bedFile.o lineFileUtilities.o gzstream.o fileType.o
15 EXT_OBJECTS=$(patsubst %,$(OBJ_DIR)/%,$(_EXT_OBJECTS))
16 BUILT_OBJECTS= $(patsubst %,$(OBJ_DIR)/%,$(OBJECTS))
17 PROGRAM= closestBed
18
19 all: $(PROGRAM)
20
21 .PHONY: all
22
23 $(PROGRAM): $(BUILT_OBJECTS) $(EXT_OBJECTS)
24 @echo " * linking $(PROGRAM)"
25 @$(CXX) $(LDFLAGS) $(CXXFLAGS) -o $(BIN_DIR)/$@ $^ $(LIBS)
26
27 $(BUILT_OBJECTS): $(SOURCES)
28 @echo " * compiling" $(*F).cpp
29 @$(CXX) -c -o $@ $(*F).cpp $(LDFLAGS) $(CXXFLAGS) $(INCLUDES)
30
31 $(EXT_OBJECTS):
32 @$(MAKE) --no-print-directory -C $(UTILITIES_DIR)/gzstream/
33 @$(MAKE) --no-print-directory -C $(UTILITIES_DIR)/bedFile/
34 @$(MAKE) --no-print-directory -C $(UTILITIES_DIR)/lineFileUtilities/
35 @$(MAKE) --no-print-directory -C $(UTILITIES_DIR)/fileType/
36
37 clean:
38 @echo "Cleaning up."
39 @rm -f $(OBJ_DIR)/* $(BIN_DIR)/*
40
41 .PHONY: clean